KEGG   Leucobacter luti: K1X41_11790
Entry
K1X41_11790       CDS       T08001                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K10843  DNA excision repair protein ERCC-3 [EC:5.6.2.4]
Organism
llut  Leucobacter luti
Pathway
llut03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:llut00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    K1X41_11790
  09124 Replication and repair
   03420 Nucleotide excision repair
    K1X41_11790
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:llut03021]
    K1X41_11790
   03400 DNA repair and recombination proteins [BR:llut03400]
    K1X41_11790
Enzymes [BR:llut01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     K1X41_11790
Transcription machinery [BR:llut03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     K1X41_11790
DNA repair and recombination proteins [BR:llut03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     K1X41_11790
SSDB
Motif
Pfam: Helicase_C_3 ERCC3_RAD25_C ResIII Helicase_C DEAD
Other DBs
NCBI-ProteinID: QYM75318
Position
complement(2642078..2643712)
AA seq 544 aa
MTLGPLIVQSDHTVLLEVAHPQAEDARHELAVFAELERAPEHIHTYRVTRLGLWNARAAG
HTSEEILDTLNRYAKFPVPSGVASEIEDTMRRYGRLTIERDAEGALVLRSEDAAVLREVT
SAKKIAPLLGNKTDDRTYPVEAWARGELKQQLVARGWPAEDLAGYTPGEPYDIELELDGW
ELRDYQAKAVEAFQRGGSGVVVLPCGAGKTIVGAASMAAVGAKTLVLVTNAVSARQWRDE
LLRRTTLTADDIGEYSGQVKEIKPVTIATYQILTSRRKGEYAHLSLLDAQDWGVIVYDEV
HLLPAPVFKLTADLQARRRLGLTATLVREDGREGDVFSLIGPKRYDAAWKDIEAQGFIAP
AACFEVRVGLSESERMDYAVAEDQDRYRIASSTTVKEQIARRIIARHPGESVLVIGQYID
QLESMSETLGAPLITGQTPVDERERLFQAFRSGEEKILVVSKVANFSVDLPDASVAVQIS
GSFGSRQEEAQRLGRLLRPKANGATASFYTLITRDTVDQDFAQNRQRFLAEQGYAYTILD
EDQI
NT seq 1635 nt   +upstreamnt  +downstreamnt
atgacactcggcccactcatcgtgcagagcgaccacaccgtcctcctcgaggttgcccac
ccccaagcggaggatgctcggcacgaactcgcggtgtttgcggagctcgaacgcgcgccg
gagcacatccacacctatcgcgtgacgcgtctcggactgtggaatgcgcgggccgcgggg
cacacctccgaagagatcctcgacacgctcaatcgctacgcgaagtttccggttccctcc
ggcgttgccagtgaaatcgaagacaccatgcggcgctacgggcgtctcaccattgagcga
gacgctgagggtgcgctcgtgctccgttcagaagacgccgcagtgctccgcgaggtgacg
agcgcaaagaagattgcgccgctgctcggcaacaaaaccgacgaccgcacttaccctgtt
gaggcgtgggcgcgcggcgagttgaaacagcagttggtggcgcgcggctggcccgcggag
gatctcgcgggctacacgccgggtgagccgtatgacatcgaactcgagctggacggctgg
gagctgcgcgactaccaggcaaaggcagtcgaggcattccagcgtggcggatccggggtc
gtcgtgctcccctgtggcgcaggcaagacgattgttggcgctgcctccatggcggcagtc
ggcgcgaaaacactcgtgctcgtgacgaatgcggtgtccgccaggcagtggcgagacgag
ctccttcgtcgcaccacactcaccgcggacgatatcggggagtactcgggccaggtgaag
gagatcaaacctgtcacgatcgcgacgtaccagatcctgacgagccgcaggaaaggcgaa
tacgcgcatctgtcgctcctcgacgcccaggactggggggtcatcgtgtacgacgaggtg
cacctcttgcctgccccggtgttcaagctgacagccgatctgcaggcacgccgccggctc
ggcctcaccgcaacgcttgtgcgtgaggatggccgcgagggcgatgtgtttagtttgatc
ggtccgaaacgctatgacgccgcgtggaaagacatcgaggcgcaggggttcatcgcgcca
gccgcatgcttcgaggtgcgcgttgggctcagcgagtccgagcgcatggactacgcggtt
gcggaagatcaggatcgctatcggatcgcgtcgagcacgaccgtgaaggaacagatcgcc
cgccgaatcattgcgcgccatcctggtgagagcgtgctcgtgatcggccagtacatcgac
cagctcgagtcgatgtccgagacgctcggcgctccgctgatcacgggccagacgcccgtc
gatgagcgcgagcggctgtttcaggcgttccgatcaggcgaagaaaagatcctcgtcgtt
tcgaaggtcgcaaatttctcagtggatctcccggatgcgtcggtcgccgtgcagatctcc
ggatcgtttggttcacggcaagaagaggcccagcgtctcggccggctactccgcccgaaa
gcgaacggcgcaacggcatcgttctacaccctcatcactcgtgacacggttgatcaggac
tttgcgcaaaaccggcagcgttttcttgccgagcagggctatgcgtacacgatcctcgac
gaggatcagatctag

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