KEGG   Larus michahellis (yellow-legged gull): 141745016
Entry
141745016         CDS       T11135                                 
Symbol
POLL
Name
(RefSeq) DNA polymerase lambda isoform X1
  KO
K03512  DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
Organism
lmic  Larus michahellis (yellow-legged gull)
Pathway
lmic03410  Base excision repair
lmic03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:lmic00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    141745016 (POLL)
   03450 Non-homologous end-joining
    141745016 (POLL)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lmic03400]
    141745016 (POLL)
Enzymes [BR:lmic01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     141745016 (POLL)
DNA repair and recombination proteins [BR:lmic03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     141745016 (POLL)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    X-family DNA polymerases
     141745016 (POLL)
SSDB
Motif
Pfam: DNA_pol_B_palm DNA_pol_B_thumb DNA_pol_lambd_f HHH_8 BRCT BRCT_2 NS7b_batCoV-HKU9 HHH_5 PTCB-BRCT LIG3_BRCT NTP_transf_2 HHH zf-LYAR
Other DBs
NCBI-GeneID: 141745016
NCBI-ProteinID: XP_074448157
Position
6:58370392..58383267
AA seq 579 aa
MEPQGIVKAFPKRKKVRDDSGKSIPPKIPKEEGSEISGAEWLKPVTAYVLQAGIGQARAE
IFHKQIVQNGGVIRNQLSSEVTHVIVAEDMDCDRAFRLLKLTKLPSGLQLVKASWLSACI
RDQKLLSTAGYGVFIPRRYLEEEELQKEQQQVLRGEEIQPPAEEGAVKPNTEAEVGNSSQ
RGLGTLGRQQLAEKISDDEDSEGEDASVTQGDLEALISGRYPVKSSEETSDSSSAVAQPA
SKWVCAHSSNSKKDNHNQCITEKLEVLAKAYSVQGDKWRALGYAKAINALKSYHKPVTSY
QEACKIPGIGKRMAEKILEILESGHLRKLDHISESVPVLELFSNIWGAGVKTAQMWYQQG
FRTLDDIRTKATLTSQQAVGLKHYTDFLERMPREEAAEIEQTVRQAALALKPGLVCVACG
SYRRGKPTCGDVDVLVTHPDGQSHRGVFSKLLDSLHRSGFLTDDLVSQEDNGDQKKYLGV
CRLPGPAQHHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTAV
VRGPGGVKVASGHTLPTPTERDVFIQLGLPYREPSERDW
NT seq 1740 nt   +upstreamnt  +downstreamnt
atggagccacaagggattgtcaaagcctttcccaagaggaagaaggtgagggatgactca
gggaaaagcatccctccaaagatcccaaaagaggaaggatcagagatatctggggcagaa
tggctgaaaccagtcactgcctacgtgttgcaagctggcattggccaagccagggcagag
atcttccacaagcagattgtccagaatggcggtgttatacgcaaccagctttcctcagag
gtgacacacgtcattgtggctgaagacatggactgtgatcgggcctttcgtctccttaaa
ttaaccaagctaccttcagggttgcagctagtgaaggcatcctggctaagtgcttgcatc
agagaccagaagctgctgagtaccgccggctatggtgtctttatccctcgcaggtacctg
gaggaggaagaactacagaaagagcagcagcaggtcctgagaggtgaagagatccagccc
ccagcagaggagggagcagtgaaaccaaatactgaagcagaggttgggaattcttcgcag
cgaggcctgggtacccttggacgtcagcagctggctgagaaaatctctgatgatgaagac
agtgaaggagaagatgctagtgtcacccagggagatctggaagctttgatttctggccgc
taccctgtgaaatcatcggaggagaccagtgacagctcttctgcggtggcccagcctgcc
agcaagtgggtttgtgcccattcatccaacagcaagaaggataatcacaaccagtgcatt
acagagaagctggaagtgctggcaaaggcctattctgtccagggggacaagtggagagct
ctgggctatgccaaagccatcaatgcactcaagagctaccacaaaccagtcacgtcctac
caggaagcctgtaaaatccctgggattgggaagcgaatggcagagaagatcctggagatc
ttggagagtgggcacctgcgcaagctggatcacatcagtgagagtgtgcctgtgctggag
ctgttttccaacatctggggagcgggagtcaagacagctcagatgtggtaccagcagggt
ttccggacactggatgatatccgcaccaaggcgactctcaccagccagcaagctgtgggg
ctgaagcactacacggattttctggagcgcatgcctcgggaggaagctgcagaaatagaa
cagaccgtcagacaagctgccctggccctgaagcccgggctcgtgtgtgtggcatgtggc
tcctaccgtcgggggaagcccacctgtggagatgtggatgtgctggtcactcacccagat
gggcagtctcaccgtggagtgttcagcaagctgcttgacagcctccacaggagcggcttc
cttacagatgacctggtgagtcaggaggacaacggagatcagaagaagtacctgggggtg
tgccgcctccctggaccagcccagcatcaccgacggcttgacatcatcgtggtgccttac
agtgagtttgcctgcgccctgctctacttcactggctcagctcacttcaaccgctccatg
cgggccctggccaagaccaagggcatgagcctctcggagcatgccctcagcacagctgtg
gtgcgaggccctggaggcgtcaaggtggcatctggccatactctgcccacccctacagag
agagatgtcttcattcagctggggctgccttaccgggagccctcagaacgtgactggtga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (13)   
   Pfam (13)   
All databases (21)   

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