KEGG   Loa loa (eye worm): LOAG_02842
Entry
LOAG_02842        CDS       T02664                                 

Name
(RefSeq) 3' exoribonuclease
  KO
K12589  exosome complex component RRP42
Organism
loa  Loa loa (eye worm)
Pathway
loa03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:loa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LOAG_02842
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:loa03019]
    LOAG_02842
Messenger RNA biogenesis [BR:loa03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     LOAG_02842
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     LOAG_02842
SSDB
Motif
Pfam: RNase_PH
Other DBs
NCBI-GeneID: 9940228
NCBI-ProteinID: XP_003138427
UniProt: A0A1I7VWB6
AA seq 307 aa
MEVRLSEAEKVFIIHGAQEGLRADGRSPFDYRPVIVQTGVLATTNGSARVRIGSTDLLIG
VKAELISVENIALYRNRLNFFVDCSANATPLFAGRGGEEFADELSAALDAAYDNNYVLPD
LKKLILSPMHVWKLFVDIVLLQCDGNVIDAAGLGVKAALKDTEISKVIVRPADEGKYTID
LPDDNTVWKLNTSRVPLFVSVNRLGSAKIVDNSLAEEACTRTSVWIAAAPHFVSDTDHNK
SNQSVVKRNGGVITFMRQCGGGTLEVDSLEEMISIGLKAVRQLHEALDRRLMDENRMEEK
PLSTFLQ
NT seq 924 nt   +upstreamnt  +downstreamnt
atggaagttcgattgagtgaagccgaaaaagtattcataatacatggtgcacaagaaggt
ttacgagctgatggacgtagcccgttcgattaccgacctgtaatagtgcaaaccggtgtt
ttggcaacaacaaatggttcagcacgcgtccgaataggttcaactgatctgttaattggt
gtcaaagcggaactgattagtgtggaaaatattgctctttaccggaatcggctaaatttc
tttgttgattgttcagcaaatgccactccactctttgctggtcgtggtggtgaggaattc
gcggatgagttaagtgcagcattggatgctgcttatgacaacaactatgtgcttccagat
ttgaaaaagttgattctatctccaatgcatgtatggaaactgtttgtggatatcgttctt
ttgcagtgtgacggtaatgtcattgatgcagcaggtttaggggttaaggcagcactgaaa
gatacggaaattagcaaagttatagtcagaccagccgacgagggaaagtatacaattgat
ttgccggatgataataccgtttggaaattaaatacatcaagagttcctttgtttgtcagt
gtaaatagacttggaagtgctaaaattgttgacaattcattggcagaagaagcatgcact
cgcacatccgtttggatcgccgctgctccacattttgtttccgataccgatcacaacaaa
agtaaccagtctgtagtgaagcgtaatggtggcgtaattacttttatgaggcaatgtggt
ggtggcactcttgaggtagattcacttgaagaaatgatcagtattggcttgaaagcagtg
cgccaactacatgaagcacttgatcggagattaatggacgaaaatcggatggaagaaaaa
cctttgtcaacattcttacaataa

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