KEGG   Loa loa (eye worm): LOAG_03146
Entry
LOAG_03146        CDS       T02664                                 

Name
(RefSeq) hypothetical protein
  KO
K12624  U6 snRNA-associated Sm-like protein LSm5
Organism
loa  Loa loa (eye worm)
Pathway
loa03018  RNA degradation
loa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:loa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    LOAG_03146
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LOAG_03146
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:loa03019]
    LOAG_03146
   03041 Spliceosome [BR:loa03041]
    LOAG_03146
Messenger RNA biogenesis [BR:loa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     LOAG_03146
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     LOAG_03146
Spliceosome [BR:loa03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    LOAG_03146
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 9940539
NCBI-ProteinID: XP_003138731
UniProt: A0A1I7VSM1
AA seq 111 aa
MKDSGILYFFTSFFCSSFPNMSNSTSSNPSTLLPLELVDKCIGSRIWVIMKGEKEIVGTL
TGFDDYVNMVLEDVVEYENTVDGKRVTKLDTILLNGNHITMLVPGGEGPEV
NT seq 336 nt   +upstreamnt  +downstreamnt
atgaaggattctgggattttgtactttttcacttcttttttttgttctagctttccaaat
atgtcgaattctacatcatcgaatccgtcaacgttactaccattggaattggtagacaaa
tgtattggttccaggatctgggttattatgaaaggtgaaaaggagattgttggaacgttg
acaggttttgatgattacgttaatatggtactagaagatgttgtggagtatgaaaataca
gttgatggtaaaagagtaacgaagttagataccattttgctgaatggtaatcatatcaca
atgttggtacctggaggtgaaggtcctgaagtttaa

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