KEGG   Loa loa (eye worm): LOAG_09541
Entry
LOAG_09541        CDS       T02664                                 

Name
(RefSeq) hypothetical protein
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
loa  Loa loa (eye worm)
Pathway
loa03018  RNA degradation
loa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:loa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    LOAG_09541
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LOAG_09541
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:loa03019]
    LOAG_09541
   03041 Spliceosome [BR:loa03041]
    LOAG_09541
Messenger RNA biogenesis [BR:loa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     LOAG_09541
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     LOAG_09541
Spliceosome [BR:loa03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    LOAG_09541
SSDB
Motif
Pfam: LSM Tox-REase-7
Other DBs
NCBI-GeneID: 9946979
NCBI-ProteinID: XP_020301861
AA seq 135 aa
MVLPLSLLRTAQNHPMLVELKSGETYNGHLVACDAWMNIHLRDAICTSRDGDRFLKMQEV
YVRGSTIKYLRIPDDVVELVKEEVKEVRRQQKDQQRAKRNLQGARGGARGGSSSNRGTGR
GGSQHGWNRNKAGVQ
NT seq 408 nt   +upstreamnt  +downstreamnt
atggtgttaccactgtcacttttgcgcacagcgcagaatcatccaatgttagttgaattg
aaaagtggcgaaacttataatggacatttggttgcatgcgatgcgtggatgaatatccat
ttaagggatgctatctgtacatcacgtgatggggatcgcttcctaaaaatgcaggaagta
tatgtacgaggttcaacgatcaagtatttgcggattccggacgatgtggtagaattggta
aaagaagaggttaaggaagtacgtagacaacagaaagaccaacaacgtgccaagcgtaat
ttacagggagctcggggtggcgcacgaggaggatcttctagtaatcgtggcacaggtcgt
ggtggtagtcagcatggatggaatcgaaacaaagcaggggttcagtga

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