KEGG   Lepisosteus oculatus (spotted gar): 102683734
Entry
102683734         CDS       T07349                                 
Symbol
optn
Name
(RefSeq) optineurin isoform X1
  KO
K19946  optineurin
Organism
loc  Lepisosteus oculatus (spotted gar)
Pathway
loc04137  Mitophagy - animal
loc04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:loc00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    102683734 (optn)
   04137 Mitophagy - animal
    102683734 (optn)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:loc04131]
    102683734 (optn)
Membrane trafficking [BR:loc04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    102683734 (optn)
 Protein recycling
  Rab GTPases and associated proteins
   Other Rab GTPase associated proteins
    102683734 (optn)
 Autophagy
  Mitophagy
   PINK1-Parkin associated proteins
    102683734 (optn)
  Xenophagy
   Cargo receptors
    102683734 (optn)
SSDB
Motif
Pfam: CC2-LZ NEMO zf_C2H2_10 WipA_N DUF4248 RTBV_P46
Other DBs
NCBI-GeneID: 102683734
NCBI-ProteinID: XP_015207948
Ensembl: ENSLOCG00000015719
Position
LG8:14781864..14793339
AA seq 583 aa
MASGAPMVNGEDPQGPERSRQGQANGAQAAPHVGTPEETLQQMNILIKENSELKEALKQT
NTSMKERFEGLAAWKEKQKEEREFLENKFLEAKNRVTALTKRNEELRKRLQHLEGNEEGT
CQSEMGGQSSEVEALKVVIARLQAEKSDLLAMNSELQLKLGRGLPDDAFIEIRIAKEGDL
KLTKDLPSSEKDPSAAYIRPKSDETNERMEPEELTVSQLLQSLRHESQKVEKLELELQAY
RERISVLEKKAEMVVESATQTSLIVEGNIPSEPVGIESTSKCEADIKVQQSVSAMHDTST
TEVENLKSQMKSLFKELQQAQSKLDDAEDMKRNLHNKCREIEQDLSTLRAQLVDKQKVQN
ESDKLKLQLESMQSVGKMEQRKMEEEKRKMTQLKDAYTKLFEDYNEIKKAADGNKRTEDD
VIELNKKLAVAEQALAAKQLQIDEMKQDIFKKEQELDTISVFKAQAEVYSSDFYAERAAR
EKIHEEKERLAAQLEFVKKQNSQLQEEMESLGRQSLNEMQRRHVPRGMNPHGNPPQQNAP
GARGADNRDWQQQVNIPEHACPKCNEILPDLDSLQIHIMDCII
NT seq 1752 nt   +upstreamnt  +downstreamnt
atggcttccggcgcgccgatggtaaatggggaagatccgcagggtccggagagatctcgc
caagggcaggcaaatggggctcaggccgccccccatgttggcaccccagaggagaccctg
cagcagatgaacatcctcatcaaagagaacagtgagctgaaagaagccctgaaacaaact
aatacgtctatgaaagagcgttttgagggccttgctgcatggaaggaaaagcagaaggag
gagcgtgagtttctggagaacaagtttctggaggcgaagaatcgcgtgactgcccttacc
aagcgcaatgaagagctcaggaaaagattacagcatctggaagggaatgaagaagggact
tgtcagagtgagatggggggccagagctcggaggtggaagcgctgaaggtcgtgattgca
cggcttcaggcggagaagagcgacctgctggccatgaactcagagcttcagctgaaactg
gggcgagggctccctgatgatgccttcattgagatcagaattgcaaaggaaggagacctg
aaactaactaaggatttgccaagcagtgaaaaagatccatctgctgcatatatcaggcct
aagtctgatgaaacaaatgaacgaatggagcctgaggagttgactgtcagccagttgctt
cagtccttgcgacacgagtctcagaaggtggagaagctggagcttgagctccaagcttac
agagaaaggatatcggtattggagaaaaaggcagaaatggttgtagagagtgcaactcag
acatcactgatagttgaagggaatattccttctgagccagtggggattgaaagcacatct
aaatgtgaagctgatatcaaagttcaacagagtgtgtcagctatgcatgatacgtctaca
accgaggtggagaatttgaagtcccagatgaagtccttgtttaaagagctacagcaggcc
cagtccaaactggatgatgctgaagatatgaagagaaacctgcacaacaaatgtcgtgaa
atcgagcaggatctttctactctccgcgcgcagttggtggacaagcagaaagttcagaat
gagagcgacaagctgaaacttcagctggaaagcatgcagtctgttggtaaaatggaacag
aggaagatggaggaggaaaagagaaaaatgactcagctgaaggatgcctacacaaagctt
tttgaagattataatgagatcaagaaagcagcagatggaaacaagaggacagaggatgac
gtgatcgagctgaacaagaaactcgcagtggcggagcaggctttggctgcgaagcagctg
cagatcgacgaaatgaagcaggacatttttaaaaaggaacaggagctggataccatttct
gtgttcaaagcacaggccgaggtgtactcttctgatttctatgctgaaagagcagcgaga
gagaagatccatgaggagaaggaacggctagcagcacaattggagtttgtgaaaaagcaa
aacagccagctccaagaggagatggagtctttgggaagacagtctctgaatgaaatgcag
cgtcgccacgtgcccaggggcatgaacccccacggaaatcctccacagcagaacgcacca
ggagcaagaggtgcagataacagagactggcagcagcaggtgaatatcccggagcatgcg
tgtccaaaatgcaatgaaatcctgccagacctcgacagtctccagatccacatcatggac
tgcatcatataa

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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