KEGG   Lepisosteus oculatus (spotted gar): 102683738
Entry
102683738         CDS       T07349                                 
Symbol
rad54l
Name
(RefSeq) DNA repair and recombination protein RAD54-like
  KO
K10875  DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
loc  Lepisosteus oculatus (spotted gar)
Pathway
loc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:loc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    102683738 (rad54l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:loc03400]
    102683738 (rad54l)
DNA repair and recombination proteins [BR:loc03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Rad54 family proteins
     102683738 (rad54l)
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII HDA2-3 DEAD Rad54_N
Other DBs
NCBI-GeneID: 102683738
NCBI-ProteinID: XP_015210870
Ensembl: ENSLOCG00000004144
Position
LG10:complement(4923099..4934036)
AA seq 742 aa
MRRSLAPSQLAKRKQGDSSEDEDWHPEATPKRRRGGSVSGRRESYVSPFRKPLTPLTNQP
VCLDSSAHEAFIRCILSKPFKVPIPNYTGPLGIRALGLKRAGVRKALHDPFEEGALVLYE
PPQLSAHELIKADKEKLPVHVVVDPVLSKVLRPHQREGVKFLWDCVTGRRIPQSYGCIMG
DEMGLGKTLQCIALMWTLLRQSPDAKPEIDKAIVVAPSSLVRNWYNEVGKWLAGRIHPVA
IDGGSKEEIDRKLVHFISQQGLRVPSPILIISYETFRLHAAVLHKGKVGLVICDEGHRLK
NSENQTYQALNAMSSQRRVLISGTPIQNDLLEYFSLVHFVNAGILGTAQEFKKRFEIPIL
KGRDADASDKDRQCGEEKLKELISIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTE
LYKRFLQQAKPEEELQTGKISVSSLSSITSLKKLCNHPSLIYDKCLEGEEGFDGALELFP
PGYSPKAVEPQLSGKMLVLDYILAMTRSTTSDKVVLVSNYTQTLDLFEKLCRSRRYLYVR
LDGTMSIKKRAKIVERFNSPSNPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQ
AMARVWRDGQKKTCYIYRLLSTGTIEEKILQRQAHKKALSSCVVDEEQDVERHFSLEELR
ELFCLREDTASDXXPRFRCRRCVNGRQVRAPPDDADCTSDLSQWHHGSDRRGLRDPVLQA
SWDAGVSFVFHQRSHEDQRGLL
NT seq 2229 nt   +upstreamnt  +downstreamnt
atgagacggagccttgctcccagtcagctggccaagaggaagcaaggagattcctctgaa
gatgaggactggcacccggaggcgaccccgaagcgcaggagaggtgggagtgtgagtgga
agaagagagagctacgtctcccctttccgtaagcccctcaccccgctcaccaaccagccc
gtctgtctggacagcagcgcgcatgaagccttcattcgctgtattctctcaaagccgttt
aaagttcccattccaaattacactggcccgcttggtatcagagctctgggtttgaagcga
gctggagtccggaaggcacttcatgacccctttgaagaaggagcgctggtgttgtatgag
cctccccagctgagtgctcatgaattgatcaaggcagacaaggagaaactccctgtgcat
gttgttgtggatcccgtgttgagtaaagtgttgagaccccaccagagagagggggtgaag
ttcctgtgggactgtgtcacgggcaggcgcattcctcagagctacggctgcatcatggga
gatgagatggggctgggaaagaccctgcagtgcatcgcgctgatgtggaccctgctcagg
cagagccccgacgccaagccggagatcgacaaggccatcgtggtggcgccctccagcctg
gtgaggaactggtacaacgaggtggggaagtggctggcagggagaatccatccggtggcc
atcgacgggggctcgaaagaggagatcgaccgaaaactcgtccatttcatctcgcagcaa
ggcctgagggtcccatctcctatcctgatcatttcttacgagactttccgtctgcatgct
gctgtcctgcacaaaggcaaggttgggctggtcatctgcgatgagggtcaccgtctaaag
aactcggagaaccagacgtaccaggctctgaatgccatgagttcccagcgccgtgtcctc
atctctgggacgcctatccagaatgatctgctggagtactttagcctggtgcactttgtg
aatgctggtatcctcgggactgctcaggagtttaagaagcgctttgaaatccccatcttg
aagggacgtgatgctgatgccagtgacaaagacaggcagtgtggggaggagaagctcaaa
gagctcatctccattgtcaacaggtgtttaatcagaaggacgtcggatattctttcgaag
tacctgcctgtgaagatcgagcaggtcgtctgctgcaggctgacccctctgcagacagag
ctgtacaagcggttcctgcagcaggccaagcctgaggaggagctgcagacgggcaagatc
tccgtgtcctcactgtcctccataacctctctgaagaagctctgcaaccacccgtctctt
atctatgacaagtgtcttgaaggagaggaaggcttcgatggtgccctggagctgttcccc
ccagggtacagccctaaggctgtggagccacagctctccgggaagatgcttgtgctggat
tatattctggccatgacaagaagcaccaccagcgataaagtggttctggtatcgaactac
actcagactctggacctctttgagaagctgtgccgatctcggaggtacctctatgttcga
ttggatggtaccatgtccattaagaagagggcgaaaattgtggagagattcaacagcccc
tctaacccagagttcattttcatgctgagcagcaaggctgggggctgtgggctgaatctg
atcggcgccaaccgcctggtgatgtttgacccggactggaacccagcgaacgacgagcag
gccatggcccgcgtgtggcgagacgggcagaagaagacgtgctacatctacaggctcctc
tcgacggggacgatcgaggagaagatcctccagcgccaggcccacaagaaggccctgagc
agctgcgtggtggacgaggagcaggacgtggagcgccacttctccctggaggagctgcgc
gagctcttctgcctgcgcgaggacacggccagcgacannngccctaggttccgctgccgg
cgctgtgtgaacgggcggcaggtccgcgccccccccgacgacgccgactgcaccagcgac
ctgtcccagtggcaccacggctcggacaggaggggcttgagggacccggtgctgcaggcg
tcctgggacgcgggcgtctccttcgtcttccaccagcggtcccacgaggaccagagaggg
ctgctgtga

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (11)   

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