KEGG   Lepisosteus oculatus (spotted gar): 102692872
Entry
102692872         CDS       T07349                                 
Name
(RefSeq) perforin-1-like
  KO
K07818  perforin 1
Organism
loc  Lepisosteus oculatus (spotted gar)
Pathway
loc04210  Apoptosis
Brite
KEGG Orthology (KO) [BR:loc00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    102692872
SSDB
Motif
Pfam: MACPF C2
Other DBs
NCBI-GeneID: 102692872
NCBI-ProteinID: XP_006627400
Ensembl: ENSLOCG00000013225
Position
LG2:57613224..57622099
AA seq 580 aa
MKELVCVLGTLHLLLSPTVIKACTTGTINECKEADYVPGYNFAGEGFDIVKMERKGAYVI
NVNSWRKKDKTCTLCPNSYLENKAQKLPLTVVDWRTLPHCKMQVTSKMYDSSESFVNNSL
SSVENNWKAGLDLSLGTKPGGSLMIGGTHSKAAKYTMEKSKSDKYTFLTHEVECVFYSYR
VVDYPKLSKEFFGSLKRLPKVYDHNTKEQYRKLIDTYGTHFIRKVKLGGKVRTTTSVKSC
EMALDGFSETEVKDCLDVEASLTAGQRASVKTEYHHCKNDQKTRGTKESFHSTFSERLSE
VTGGQVEGVDILFSGDSDPKAFQDWVTSLKTNPDIVSYSLEPMHNLVSLKQVSKKPNLKK
AIEEYILEQALYKNCSSKCASGSTPSTRDSCNCVCEANSEVNSKCCPMERGLAKLTVKVE
KAAGLWGDHFSQTDAYVKLSYKNQNLQTRVIYDQNNPVWQESLYFGTVKLTLDSTVNIEV
WDEDKMWYKWWNDILGKCSIKLQRGSRSDMCTLNHGTLYFSYTVECAPGLGGTTCTDYIP
SPMSPSLAKTFASRNAVSMSQGLLDQLRAGHSMANSSCYT
NT seq 1743 nt   +upstreamnt  +downstreamnt
atgaaggagcttgtttgtgtccttgggactctacatctcctgctctcccccacagtcatt
aaagcctgcaccactggcaccatcaatgaatgcaaagaagctgattatgtgcccgggtac
aacttcgcaggggaagggtttgacatcgtcaagatggagcggaagggggcctacgtcatc
aacgtcaacagctggaggaagaaggacaagacctgcactctttgccccaactcctacttg
gagaacaaggcccagaagcttcccttgaccgtggtggactggcgcactcttcctcactgc
aagatgcaggtgaccagcaagatgtacgactccagcgaatcctttgtcaacaacagcctt
tcttcggtggagaacaactggaaagccggtttggatctctcgttgggcactaagccggga
ggttcgctcatgattggtggcacccactccaaagctgcaaagtacaccatggagaagtcc
aaatcagacaagtacaccttcctcacccacgaagtggagtgtgtattttacagttacaga
gtggtagattaccctaagctttccaaagaatttttcggttccctgaagcgactccctaaa
gtgtatgaccacaacacaaaggagcagtaccgcaagctgattgacacctacggcacccat
ttcatcaggaaagtgaagctgggagggaaagtcaggacgacaacatctgttaaaagctgc
gagatggccttggatggattttccgaaactgaggtgaaggactgcctagatgtggaggcc
tcgcttaccgccggacaacgtgcctctgtgaaaacagaatatcatcactgcaagaatgac
cagaagacacgaggaactaaagagagcttccacagcacgtttagcgagaggctatcagag
gtaacaggcgggcaggtagaaggggtggacatcctcttttctggagattcagaccccaaa
gcatttcaagactgggtgacgagcctgaagaccaacccagacattgtctcctactccttg
gaacccatgcataacctggtcagcctgaaacaagtctcaaaaaagccaaacctgaagaaa
gccatagaggaatacatcctggagcaagccctgtacaagaactgttccagcaagtgcgcc
tcgggctccacgcccagcacgagggattcctgcaactgtgtgtgcgaggccaacagcgaa
gtcaacagcaagtgctgccccatggagcgaggcttggccaagctcacggttaaagtagag
aaggctgctggactgtggggggatcatttcagccagacggacgcctacgtcaagctctct
tataagaatcaaaacctgcagaccagagtgatttatgaccagaacaaccctgtctggcaa
gagagcctttattttgggactgtaaagctgaccctggattccacggtaaacattgaagtg
tgggatgaagataaaatgtggtacaagtggtggaatgatattctcgggaagtgctctata
aaacttcaaagaggctcccgctcagacatgtgcaccctcaaccacggcactctgtacttc
tcttacactgttgagtgtgccccgggcttaggcggcacaacttgcacagattacatcccg
tctcccatgagccccagtctggccaagacatttgcatccaggaatgcagtgtccatgtct
caaggcctgctggaccagctacgcgctggacactccatggcgaactcatcatgctacacc
tga

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (7)   

Download RDF
DBGET integrated database retrieval system