KEGG   Labeo rohita (rohu): 127169671
Entry
127169671         CDS       T09007                                 
Symbol
rab11fip1a
Name
(RefSeq) rab11 family-interacting protein 1
  KO
K12484  Rab11 family-interacting protein 1/2/5
Organism
lroh  Labeo rohita (rohu)
Pathway
lroh04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:lroh00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    127169671 (rab11fip1a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lroh04131]
    127169671 (rab11fip1a)
Membrane trafficking [BR:lroh04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    127169671 (rab11fip1a)
SSDB
Motif
Pfam: C2 RBD-FIP
Other DBs
NCBI-GeneID: 127169671
NCBI-ProteinID: XP_050973154
Position
8:8844941..8874351
AA seq 1184 aa
MSLGDQQWYPTSVQVTVLKARNLRIKGKNGTNDAYAIMQVGKDKFSTSVAEKCVSPEWKE
EATFDLPLIHQGNAERCTLYIIAMHRALVGLDKFLGQAVINLLDLHANRSRKKTDWYKLV
DKNGKQEKDRGEVLLDIQFMRNNLTASMFDLSMTDKPRSGIGKLKDKIRGKKKDGMSDSV
SAIVPSSVVTDSEEEGEGGSDNPKKKSKLKSLFGPKTNLQRNVSQSMSTLGTLPEKNSSL
SSSRSSGLNVDSPDVKKKFKILGHKRTESSDSKVSLGPFSLLSRSKQNIQEQNNLCINGS
HVYAEDQEPKANFGSTLSLNSSGKGSVEDVRKYHKRNTSDISVDSLKGLSIPSYKPEVQD
KASLVPQRPLEERSHVEVEDRGRKSEGRSLQEMLDRQEEQEQRKQQERERKLEEERKSRL
EEQERKRKEEEELQRKRREEETQRAEEQRHQEESRVTERLSSLFGIGKKKEEKREEAMNE
PKRLNVPSSTNPFEDIPLTPETPSSVPEERSTDLQRGVRTTLTPTPPTSAFPSRTAKVSA
VKPRLTLSVLPETDNSHSQSPSDSVDTQSTIHAPPLSPSLSTDPFESFGMFSDLHSSLAP
AKPPRTFSELSESSMEDLSAPKSDTKRKAPLPPGYPGGLSKTERHSDNGGQAHTQNSKDR
PSLPLPDYESLYPKKRHGVVGQTRWDHLIAEVNQRNWDFSEEVNVDGPERSMTVLKDRTS
VNLNQHQRNYEAPPPAPVRHKEALIPRKGQAPAPPEPSVETNVQHGHIKESLYATVNKPS
NSAPKNLENSPPPAVHSRRVPQEMEGKTDAITEIEKPTPAARSVQNLHSKTDDVAKEMPS
VKPRQQSLVKDPVRQVQPDKQVTNQPMTSENNKTEKQHKGQKGSISTDGFVEVDLRTAGK
LDPFPSDNLISNDPWALPQQNEDDLFTRGSKQMGNHKDQTSTVNKKDKSANKGTNDPFTN
LSEKSASPKSEHGKQSPSFTEQARATFQRNFSLRKKNSSCQYPTTPKSDTENTSLARSVS
QSSQDADDVELTVTSVAPPSRSDPTMVTSESLIGGKTTLRAWVSPSEAQPVALQNGSGSA
VSNSRRPHPVKPMSTESQSSSVIAVGKDPKTITIKEMAEKSKNTDSGPYTQLTQEELITL
VVKQQTELSKKDARITELEDYIDNLLVRVMEEKPAILLSLNSKC
NT seq 3555 nt   +upstreamnt  +downstreamnt
atgtctttgggtgaccagcagtggtatcccactagcgttcaggtaacggtgctcaaagcg
cgaaacctgcggatcaagggcaaaaatggcacgaacgacgcttatgccatcatgcaggtg
ggcaaggacaagttttccacctcggtagcggagaaatgcgtctcgcccgaatggaaggag
gaagcgacgttcgatctgccgctgatccatcaggggaacgcggagcgatgcacactgtac
atcatcgccatgcaccgagccctggtggggctggacaagtttttgggacaggctgtcatc
aacttactggacctccacgccaacagatcacggaaaaagaccgactggtacaagttggtg
gataagaatgggaaacaggagaaggacagaggggaagttcttttggacattcagttcatg
cggaataacctgacagccagcatgtttgacctctccatgacagacaagccacgctccggc
atcggcaagctcaaggataaaattcgcggtaagaagaaagacggcatgtcggattctgtc
tctgcgatcgtgccatcttcagtggtaacagacagtgaagaggaaggagagggcggttca
gacaatcctaagaagaaatcaaaactcaaatccttgtttggaccaaagacaaacctccaa
aggaatgtgtcccagtccatgtcaaccctgggcaccctgcctgagaagaacagttcactc
agcagcagcagatcatctggccttaatgtggactcacctgatgtgaaaaagaagtttaaa
attctgggacacaagcgcactgagagctcagatagcaaagtgtctcttggccccttttct
cttttgagccgctctaaacaaaacatccaggagcagaacaacctctgtatcaacggcagc
cacgtttatgcagaggaccaagaacctaaagcgaattttggctccacactcagtctgaac
agctcaggaaagggttcggtagaagatgttcgtaaataccacaagcgaaatacctctgac
atctccgtcgactcactcaaaggcctgagtatcccctcatacaagcctgaagtgcaagac
aaagcttctcttgtcccacagcgccctctagaggaaaggagtcatgtagaagtggaggat
agaggtaggaaatctgaaggaagaagcctgcaagagatgctggaccgacaggaagagcaa
gagcagaggaagcagcaagaacgagagagaaaactggaggaagagaggaaaagcagactt
gaagagcaggagaggaaacgcaaggaagaggaagagctgcagaggaagcggcgtgaggag
gagacgcagcgagccgaggagcagcgacaccaggaggagagcagagtaaccgaacggctc
tcttctctctttggcattggaaagaagaaggaggagaagagagaggaagctatgaatgaa
cctaaacgtctgaatgtgccatcttccacaaacccatttgaagacattcctctcaccccg
gagactccatcctctgttccagaagagagatccacggacctacagaggggcgtcaggacc
acactcaccccgacgcctcccactagtgctttccccagtcgcacagcgaaagtgtctgca
gtcaagccaagattgactctgagtgtactgcctgaaacagataatagccattcccaatcc
ccctcagactctgtagacacccagagcactatccacgctcctccactttccccatccctt
tctactgatccgtttgagtcttttggtatgttttctgatcttcattcttctctggcacct
gctaaacctccgagaactttcagtgagttaagtgaatccagcatggaagacctctcagct
cccaaatctgacacaaagcgaaaggctcctctacccccgggatatcctgggggcttgtct
aagaccgaaagacattctgataatgggggacaagcccatactcagaactccaaagataga
ccttctcttcctctcccagactatgaatccctctatcctaagaagaggcatggagtagtg
ggtcagacacgctgggatcatcttatcgcagaggtaaaccagagaaactgggatttctcg
gaagaagttaatgtagatggacctgagaggtcgatgacggtcttaaaggacagaacctct
gtgaaccttaaccagcaccaaagaaattacgaggcacctccccctgcccctgtgaggcat
aaagaagcactcattccacgcaaaggtcaagctcctgcaccaccagaaccatcggttgag
actaatgtccaacatgggcatatcaaagagtctttatatgccactgtcaacaagcctagt
aactctgctcccaagaacttggaaaacagtccacctcccgctgtccatagtcgacgtgta
cctcaggagatggaagggaagactgatgccattacggaaatagaaaagcctacgccagct
gcaagatccgtacaaaatctacattcaaagactgatgatgtggctaaagagatgccttca
gtcaaacccagacaacagtcattagtcaaggacccagtcagacaagttcaaccagacaag
caggtaaccaatcaacccatgacatcagaaaacaacaaaactgagaaacaacacaagggc
caaaagggaagcatttccacagatgggtttgttgaagtagacctcagaactgctggaaaa
cttgacccattcccaagcgataacctaatatctaacgatccctgggctttaccacagcag
aatgaagatgacctgttcactaggggctcaaaacaaatgggaaatcataaagatcagaca
tcaactgttaataagaaagataagtctgcaaacaaaggaacaaatgatccattcacaaat
ctttcagagaaaagcgcgtcaccgaaatcagagcatggaaaacaatcgcccagcttcact
gaacaagccagagccacatttcaaagaaatttttcacttagaaagaaaaattcatcttgc
caatatccaactactccaaaatctgatacagagaatacaagcctggctagatcagtttct
cagtcttcacaagatgctgacgatgttgagctgactgtaaccagtgttgctccaccaagc
agatctgatcccacaatggtaacatctgaatccctcattgggggcaagactactcttcgt
gcttgggtctcgccatcagaggcccagccggttgctttgcagaatggtagtggaagtgca
gtttctaattcaagaaggcctcacccagtgaaacccatgagcaccgagagccagtcttcc
agtgttatcgctgtgggaaaagacccgaagactatcaccatcaaggaaatggctgagaag
tcaaagaatacagatagcggtccgtacactcagctcacacaggaggaactcatcacactg
gtggtaaagcaacagaccgaactctccaagaaagacgccaggatcacggagttggaggac
tacatcgataacctactagttcgagtcatggaggagaaaccagccatcctgctttcactt
aattccaagtgttag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (6)   

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