KEGG   Litorilituus sediminis: EMK97_07490
Entry
EMK97_07490       CDS       T05852                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
lsd  Litorilituus sediminis
Pathway
lsd00740  Riboflavin metabolism
lsd01100  Metabolic pathways
lsd01110  Biosynthesis of secondary metabolites
lsd01240  Biosynthesis of cofactors
lsd02024  Quorum sensing
Module
lsd_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:lsd00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    EMK97_07490 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    EMK97_07490 (ribD)
Enzymes [BR:lsd01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     EMK97_07490 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     EMK97_07490 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Bd3614-deam
Other DBs
NCBI-ProteinID: QBG37755
UniProt: A0A4P6PD87
Position
complement(1676768..1677886)
AA seq 372 aa
MALAIELAKKGHYTTSPNPRVGCVLVNNNQIIGQGFHAKAGLAHAEVNALAEAKKHYPEL
IQGATAYVTLEPCSHTGRTPPCAQKLIDAKVARVVSAMVDPNPKVSGRGLKMLSDQGIVA
QSGLLAAEASLLNVGFIKRMTVKVPYVRCKLAASLDGKTAMQSGESKWITANEAREDVQR
LRAQSCAVIAGADSVLFDNAKMNLRWSQLGYLAKTYPENKLRQPLRVIIDSQHRLTPSLE
LFKQESPILIVQTFAETHLENQQQWPHFVEHIQVKATYDNKVCLRELLAVLAKREINEVL
IESGAKLAGAFIEQDLVDELILYQAGKLIGGDGKNLVEMPSIQSLSQAKQLKINDVRMLG
RDIKITAKFERE
NT seq 1119 nt   +upstreamnt  +downstreamnt
atggccttggctattgagcttgccaaaaaaggtcattacaccacgtcacccaaccctaga
gtcggttgtgttttagttaacaataatcaaattattggccaaggttttcatgctaaagcg
ggcttagctcatgccgaagtcaatgccttagctgaagctaaaaagcattatcctgagctt
attcaaggtgctacagcttatgttaccttagagccatgcagccataccgggcgaacacca
ccctgtgcccaaaaacttattgatgctaaggttgctcgtgtcgtttctgctatggttgac
ccaaaccctaaggtgtctggtcgaggcttaaaaatgttatcggatcaaggcatagttgcg
caatctggtctgttagcagcagaggctagtttgttaaatgtcggttttattaaacgcatg
acagtaaaagtgccttacgttcgttgtaagcttgccgccagtttagatggtaaaacggca
atgcaaagtggtgaaagtaagtggataactgcaaatgaagccagagaagatgtacaaagg
ttaagagcgcagagctgcgctgttatagccggtgctgattctgtattatttgataatgcc
aaaatgaaccttcgttggtcgcaattaggttatttagcaaaaacctatcctgaaaataaa
ttaagacagccacttagggtaatcattgatagccagcaccgactaactccatcgcttgag
ttatttaagcaagagtcacctatattaatcgtacaaacttttgctgaaacgcaccttgaa
aaccaacagcaatggcctcattttgttgagcatattcaggtaaaagcaacatacgacaac
aaggtatgtttacgtgaattgcttgctgtgcttgccaagcgtgaaattaatgaagtactc
attgagtcaggtgcaaaattagccggcgcttttattgagcaagatttagtggatgagcta
atactgtatcaagcaggtaaactcattggtggtgatggcaaaaacctagtagaaatgccg
agcattcaatcactttcgcaagcaaagcaattaaaaatcaatgatgttcgcatgctagga
cgtgatattaaaattaccgcaaaatttgaaagagaataa

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