KEGG   Lonchura striata (white-rumped munia): 110473588
Entry
110473588         CDS       T05897                                 
Symbol
POLL
Name
(RefSeq) DNA polymerase lambda
  KO
K03512  DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
Organism
lsr  Lonchura striata (white-rumped munia)
Pathway
lsr03410  Base excision repair
lsr03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:lsr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    110473588 (POLL)
   03450 Non-homologous end-joining
    110473588 (POLL)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lsr03400]
    110473588 (POLL)
Enzymes [BR:lsr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     110473588 (POLL)
DNA repair and recombination proteins [BR:lsr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     110473588 (POLL)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    X-family DNA polymerases
     110473588 (POLL)
SSDB
Motif
Pfam: DNA_pol_B_palm DNA_pol_lambd_f DNA_pol_B_thumb HHH_8 BRCT BRCT_2 HHH_5 PTCB-BRCT LIG3_BRCT NTP_transf_2 HHH NS7b_batCoV-HKU9
Other DBs
NCBI-GeneID: 110473588
NCBI-ProteinID: XP_021391913
UniProt: A0A218V9E6
Position
6:22359031..22370166
AA seq 579 aa
MEPQGIVKAFPKRKKVRDDSEKSIPPKISKEEGTEIPEAEWLKPVIAYVLQAGIGQTRAE
IFRRQIVQNGGIVHRQLSSEVTHVIVAEDMDCERAFRLLRLTKLRPGLQLVKAAWLSACI
RDQKLLSTAGYGVFIPHRYLEEEELQKEQQQIPDRGKIQLPAEEGASKQSTESQVEDSSQ
RGLGTLGQQQLAEKYSDDEDSEGEDAGVTQGDLEALISGHYPVKSSEEISDSSYTVAQPP
SKWVCAQSSNTKKENHNQCITEKLEVLAKAYSVQGDKWRALGYSKAINALKSYHKPVTSY
QEACKIPGIGKRMAEKILEILESGHLRKLDHISESVPVLELFSNIWGAGVKTAQMWYQQG
FRTLDDIRTKATLTRQQAVGLKHYTDFLERMPREEAAEIEQTVRQAALALKPGLVCIACG
SYRRGKATCGDVDVLVTHPDGQSHRGVFSKLLNSLRRSGFLTDDLVSQEDNGDQQKYLGV
CRLPGPAQRHRRLDIIVVPYGEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSSAV
VRGPGGAKVASGHTLPTPTERDVFIQLGLPYREPSERDW
NT seq 1740 nt   +upstreamnt  +downstreamnt
atggagccacaagggattgtcaaagcctttcccaagaggaagaaggtgagggatgactcg
gagaaaagcatccctccaaagatctcgaaagaggaaggaacagagatacctgaggcagag
tggctgaaaccagtcatcgcctatgtgttgcaagccggcattgggcagaccagggccgag
atcttccgcaggcagatcgtccagaacgggggtatcgttcacaggcagctctcctcggag
gtgacacacgtcattgtggctgaggacatggactgtgagcgcgcctttcggctcctcaga
ttgaccaagctgcgcccggggctgcagctggtgaaggcagcctggcttagtgcttgcatt
agggaccagaagctgctgagtactgctggctatggtgtctttatccctcacaggtacctg
gaggaagaggaattgcagaaagaacagcaacagatcccggacagaggaaaaatccagctg
ccagcagaggagggagcatcaaaacagagtactgaatcccaggtggaggattcctcacag
cgaggcttgggcacccttgggcagcagcaactggctgagaaatactctgatgatgaagac
agtgaaggagaagatgctggtgtcacccagggagatctggaagcattgatttctggccac
taccctgtgaaatcatcagaggagatcagtgacagctcttacacagtggcccagcctccc
agcaagtgggtttgtgcccagtcttccaacaccaagaaggaaaatcacaaccaatgcatc
acagagaagctggaagtgctggcaaaggcttactctgtccagggggacaagtggagagct
ctgggctactccaaagcaatcaatgcactcaagagctaccacaagccagtcacctcctac
caggaagcctgtaaaatccctgggattgggaagcggatggcagagaagatcctggagatc
ttggagagtgggcacctgcgcaagctggatcacatcagtgagagtgtgcctgtgctggag
ttattttccaacatctggggagcaggggtcaagacagctcagatgtggtaccagcagggt
ttccggacactggatgacatccgcaccaaggccactctgaccaggcagcaggctgtgggg
ctgaagcactacacggatttcctggagcgcatgcctcgggaggaagctgcagaaatagag
cagactgtcagacaagctgccctggccctgaagcctggcctcgtgtgtattgcgtgtggc
tcctaccgtcgggggaaggccacgtgtggagatgtggatgtgcttgtcactcacccagat
gggcagtctcaccgtggggtgttcagcaagctgctcaacagcctccgcaggagcggcttc
cttacagatgacctggtgagtcaggaggacaacggtgatcagcagaagtacctgggcgtg
tgccgcctgcccgggccagcgcagcggcaccgccggctggacatcatcgtggtgccgtac
ggcgagttcgcctgtgccctgctctacttcacgggctcggctcacttcaaccgctccatg
cgcgccctggccaagaccaagggcatgagcctgtcggagcacgcgctcagctcggccgtg
gtgcgaggccccgggggtgccaaggtggcatctggccatactctgcccacgcccaccgag
agagatgtcttcatccagctggggctgccttaccgggagccctccgaacgggactggtga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (12)   
   Pfam (12)   
All databases (25)   

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