KEGG   Lonchura striata (white-rumped munia): 110479862
Entry
110479862         CDS       T05897                                 
Symbol
ARID2
Name
(RefSeq) AT-rich interactive domain-containing protein 2
  KO
K11765  AT-rich interactive domain-containing protein 2
Organism
lsr  Lonchura striata (white-rumped munia)
Pathway
lsr03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:lsr00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    110479862 (ARID2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:lsr03000]
    110479862 (ARID2)
   03021 Transcription machinery [BR:lsr03021]
    110479862 (ARID2)
   03036 Chromosome and associated proteins [BR:lsr03036]
    110479862 (ARID2)
Transcription factors [BR:lsr03000]
 Eukaryotic type
  Helix-turn-helix
   ARID
    110479862 (ARID2)
Transcription machinery [BR:lsr03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     110479862 (ARID2)
Chromosome and associated proteins [BR:lsr03036]
 Eukaryotic type
  Chromatin remodeling factors
   PBAF complex
    110479862 (ARID2)
SSDB
Motif
Pfam: ARID RFX_DNA_binding TSTD2_N DUF5532
Other DBs
NCBI-GeneID: 110479862
NCBI-ProteinID: XP_021403095
UniProt: A0A218V491
Position
1A:complement(34228948..34320729)
AA seq 1825 aa
MANSTGKNHADQRRKGLAFLDELRQFHHSRGSPFKKIPVVGGKELDLHALYTRVTTLGGF
GKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEEDDEVQPGNPKP
QLPIGAIPTSYNYQQHSVSDYLRQSYGLSMDLNSPNDYNKLVLSLLSGLPNEVDFAINVC
TLLSNESKHVMQLEKDPKIITLLLANAGVFDDTLGSFSAVFGDEWKEKTDRDFVKFWKDI
VEDIEVRDLISDRSKSQDIPSEEWIWESLFHPPRKLGINDIEGQRVLQIAVILRNLSFEE
GNIKLLAANRTCLRFLLLSAHSHFISLRQLGLDTLGNIAAELLLDPVDFKTTHLMFHTVT
KCLMSRDRFLKMRGMEILANLCKAEDNGVLICEYVDQESYKEIICHLTLPDVLLVISALE
VLYMLTEMGEVACSKIAKVEKSIDTLVCLVSMDIQMFGPDALTAVKLIEHQCVSQQGILD
VRPQVMDHGSSQAHATGVPASRTAPHVAPPPGIVEIDSEKFACQWLNAHFEVNLDCSVSR
AEMYSEYLSTCSKLARGGILTSTGFYKCLRTVFPNHTVKRVEDPSNNGQAHIHVVGVKRR
AIPLPIQMYYQQPPTSSTPVVRVDSIPDVSSSPLPAGIPHGLPSVGNHYQRTPINQSSTL
TATQMSFPIQGVHTVAQTVSRIPQNPSIHTQQNAPMTVIQNKGPISCEVVKAAVIQSSVP
QSAVPVPIAVGGASNQNHSTPGQQPSVTVVSSQMLHHQPVIQQQSPLHAVVPGQIPSGTP
VTVIQQAVPQGHIFGRVQNLPACSSAVSQGQQLISTSSQPGQTSSQQASAGNQQQDTVII
APQQYVTTSASNIVSATTVQNFQVAAGQVVTIAGVQNPPTSRVGFQNIAPKPLPSQQGPP
AVGQQPQQQPPAPSQQSVVIVSQPAQQGQAYAPAIHQIVLANPASIPAGQTVQLAGQPSI
TPSSSPSPGPVTNNQVPTVMSSSSTTPQSQGPPPTVSQMLSVKRQQQQQHSPASSQQQVQ
VQQSMQMQVQSQQANTGAGQPNSGESSLIKQLLLPKRGPSTPGGKLILPAPQIPPPNNAR
APSPQVVYQMANNQTPGFGVQGQSPAQQLLVGQQNVQLVPGAIPPQGAVQTVPISNLQIL
PGQLISNSPATIFQGTTGNQVTITVVPNTSFATATVSQGNATQIIAPAGISVSGAQTGVG
LQVQTLPATQAPSAGQSPCTAAPPFKGDKIICQKEEEAKEATGLHIHERKIEVMENPSCR
RGSANTSNGDAKENEMQVGSLLNGRKYSDSSLPPSNSGKTQNEANQCSQVSNGPSLEMGE
NGAPGKQNFEQMDTQEIKSDLKKPLVNGICDFDKGDCSHLSKNIPNHKTSNHVGNGEISS
VEQQGNLDATQQDTAKGDQGERISNGPVLTLSSSPVVSGTQEAAKLLSQQLSGTNTDLPN
GPLASSLNSDVPQQRPSVVVSPQSTASVIQGHQIIAVPHSGPRVSQSTLSSEVRSTNGTA
ECKTAKRPAEDNDRETVPGIPNKVGVRIVTISDPNNAGCSATMVAVPAGADPSTVAKVAI
ESAVQQKQQHPTTYIQSMVTQSTPSTSIPTVQVQGQQMNLQPPSYTAASQHAEQMKKPGQ
NFMCLWQSCKKWFQTPSQVFYHAATEHGGKDVYPGQCLWEGCEPFQRQRFSFITHLQDKH
CSRDALLAGLKQDEQGQAGNQKPSNKQPAAGATASTPRAQKAIVNHPSAALMALRRGSRN
LVFRDFTDEKEGPITKHIRLTAALILKNIGKYSECGRRLLKRHENHLSVLAISNMEASST
LAKCLYELNFTVQSKEHEKDSEMLQ
NT seq 5478 nt   +upstreamnt  +downstreamnt
atggcaaattcgacgggtaaaaaccacgcagaccagcggagaaagggactcgctttcctg
gacgagctgcggcagtttcaccacagcagagggtctccttttaagaagatccccgtggtg
ggtgggaaggagctggatcttcacgctctctataccagagtcaccactttaggcggattt
gggaaggtatcagagaagaatcagtggggagaaattgtagaagagtttaactttcccaga
agttgttctaatgctgccttcgctttaaaacagtattacttgcgttatctagaaaagtat
gaaaaagtccatcattttggggaggaggatgatgaggtacaaccaggcaatccaaagcca
caacttcctattggtgcaattccaacttcctataactaccagcaacacagtgtgtcagat
tatcttcgtcaaagctatgggctgtctatggacttaaactcaccaaatgactataataag
ttggtgctttcactgttatctggactcccaaatgaagtggactttgcaattaatgtgtgt
actcttctttcaaatgaaagcaagcatgttatgcagcttgaaaaggaccctaaaatcatc
actttactgcttgcaaatgctggggtgtttgatgacactttaggatcattttctgctgta
tttggagacgagtggaaggagaaaactgatagagattttgttaagttttggaaggatatt
gttgaggatattgaagttcgtgatctaatttctgacagaagcaaatctcaagatattcca
tcagaagaatggatttgggaatccttatttcatccacctcgcaaattgggcattaatgat
attgaagggcagcgggtacttcagatagcagtgattttacgaaatctttcttttgaagag
ggaaatattaaacttctggcagctaatcgtacttgtcttcggttcctgctactgtctgct
cacagtcactttatttctctacggcagttggggcttgacacactgggaaatattgcagca
gagcttcttttggatcctgttgatttcaaaactactcatctaatgttccacactgttaca
aaatgcctcatgtcaagggatagatttttaaaaatgagaggcatggaaatcttggcaaat
ctttgtaaggctgaagataatggtgtcctaatttgtgaatatgtggatcaagaatcctat
aaagagatcatatgtcatctcactctaccagatgtgcttcttgtaatctcagcacttgag
gtgctatacatgctcacagaaatgggagaagtggcctgctcaaagattgctaaagtagag
aagagcatagatacattagtatgtctggtttctatggacatccagatgtttggacctgat
gctcttactgctgtaaaactcattgaacatcagtgtgttagccagcaaggaatacttgat
gtcagaccacaggtgatggatcatggttcttcacaggcccatgcaacaggtgtcccagcc
tctaggacagcaccacatgttgctccacctccaggaatagtagaaatagacagcgagaaa
tttgcatgtcaatggttgaatgcccattttgaagtgaatcttgattgctcagtctctcga
gcagaaatgtactctgaatacctctctacttgtagtaaattagctcgaggtggaatccta
acatcaactggattttataaatgcctgcgaactgtctttccaaatcataccgtgaagaga
gtagaagatccaagtaacaatggtcaagcacatatacatgtggtaggagtgaagaggaga
gctataccacttcccattcagatgtactatcagcagccaccaacttcgtctaccccagtt
gtccgggttgattcaattcctgatgtgtcttcgtctcctttgccagcaggaatccctcat
gggctaccaagtgtaggaaatcactatcagaggacccctattaaccagtcttcaactttg
acagcaactcagatgtcttttccaattcaaggtgttcacactgtggcacagactgtttct
agaattccacaaaatccttctattcatacacaacaaaatgctccaatgactgttatacag
aataaaggtccaatatcctgtgaagtagtcaaggctgcagtaatacagagctctgttcct
cagtctgcagttcctgttcctattgcagtaggaggagcttctaatcaaaatcacagcacc
ccaggccagcagccgtctgttacagttgtgagttctcagatgcttcaccaccaacctgta
attcaacaacagtccccactgcacgcagtggtaccaggacagataccttcaggcactcct
gttacggtaattcagcaagctgtacctcagggtcatatatttggcagagtacaaaaccta
ccagcatgcagttcagcagtttcacagggtcaacagctaatcagcacatcatcacagcct
gggcagacatcatctcagcaggcctctgcgggtaaccagcaacaagatacagtcatcata
gccccacagcagtatgtcacaacctctgcatctaacattgtttccgccaccacagttcaa
aatttccaagtagcagctgggcaggtggttacaattgcaggcgttcagaacccaccaaca
tctagagtagggtttcagaatattgcaccaaagcctctgccatctcagcaaggtccacct
gctgtgggacagcagccacagcagcagcctccagcaccatcccagcaaagtgtagtgata
gtaagccagccagctcagcaagggcaggcatatgcaccagccattcatcaaattgtgctt
gctaacccagcttctattcctgctggccaaactgtacagttggctggacagccaagcatt
actccatcatcttcaccgtcccctggtccagttacaaataatcaagtccctacagttatg
tcatcttcatctaccactcctcagtcacaaggaccccctcctactgttagccagatgctt
tctgtaaagaggcagcagcagcagcaacattcaccagcatcatcgcagcagcaggtacag
gtacaacaatcgatgcaaatgcaagtgcagtcacaacaagctaatacaggagctggccag
cccaactctggtgagtctagcctgataaaacaactgcttcttccaaaaagaggcccctca
actccaggggggaagcttatactcccagctccacagattcctccacctaacaatgcaaga
gctcctagccctcaggtggtttatcagatggccaataaccagacaccaggttttggagtt
caaggacagtctccagctcagcagctgctagttggacagcaaaatgttcagctggtccca
ggtgcaatcccgccccaaggggcagtgcaaacagtacccatttctaatttacagatattg
ccaggccagttgatctcaaacagcccagcaactattttccaagggactactggcaaccag
gttacgataacagttgtgccaaatacgagttttgctactgcaactgtgagtcagggaaat
gcaactcagataattgctccagcaggaatttcagtgagtggagcacagacaggagttggg
ctacaggtgcaaacccttccagctactcaagcaccttcagctggacaatcaccgtgtact
gctgctcccccattcaaaggtgataaaataatttgccaaaaggaggaagaagcaaaggaa
gcaacaggtttacacattcatgaacgtaaaattgaagttatggagaatccttcctgccga
agaggatctgcaaacaccagcaatggggatgcaaaagaaaatgaaatgcaggtgggaagt
cttttaaatgggagaaagtatagtgactccagtctacctccttctaactcagggaaaaca
cagaatgaggccaatcagtgctcacaagtcagtaatgggccatcattagaaatgggtgag
aacggagctcctggaaagcagaactttgaacaaatggacacacaggaaattaaaagtgat
ttgaagaagcccctagttaatggaatctgtgattttgataaaggagattgttctcatttg
agcaaaaacattccaaatcacaaaacttccaatcatgtaggaaatggtgagatatcttca
gtggaacaacaagggaatttggatgccacgcagcaagatactgccaaaggtgatcaaggg
gaaagaatttctaatgggcctgtattaactttgagtagttcacctgttgtaagcggtaca
caggaggctgcaaaactgttaagccagcaacttagtggtaccaacactgatttacctaat
ggacctctagcttcaagtttgaattcagatgtgcctcagcaacgcccaagtgtagttgtc
tcaccacaatctacagcctctgttatacaggggcatcaaatcatagcagttccacactca
ggacctagagtgtcccagtctaccctgtcctccgaagttcggtctactaatggcacagca
gaatgcaaaactgcaaagaggccagcagaggataatgacagggaaactgttccaggaatt
ccaaataaagtaggagttagaattgttacaatcagtgaccccaacaatgctggttgcagt
gcaactatggttgctgtgccagctggagcggatccaagcactgtagcgaaagtagcaata
gaaagtgctgttcaacaaaagcagcagcatccaaccacgtatatacaaagcatggtcaca
cagagcacaccctcaacatcgataccaacagttcaagtacagggccagcagatgaatttg
cagccaccttcatacactgcagcaagtcaacatgcagagcaaatgaaaaaacctggacag
aacttcatgtgtctgtggcagtcttgtaaaaagtggtttcagacaccatcacaggttttc
tatcatgcagcaaccgaacatggaggaaaagatgtctacccagggcagtgcttatgggag
ggatgtgaacctttccagcggcagagattttccttcattacccatttacaggataagcac
tgttccagagatgctttgcttgcaggattaaagcaagatgaacaaggacaagcaggaaat
cagaagccttccaataagcagccagctgcaggggctactgcttctactcccagagcacag
aaggccattgtgaatcatccaagtgctgccctaatggcattaaggagaggatcaagaaac
cttgtcttcagagatttcacagatgaaaaagagggaccaataactaaacacatccgatta
acagctgccttaatattaaaaaatattggtaaatattcagaatgtggtcgcaggttgcta
aaaagacatgaaaatcatctatcagtgctagccattagtaatatggaagcttcctccaca
cttgccaaatgcctttatgaacttaattttactgtccagagtaaagaacatgaaaaagac
tctgagatgctgcagtga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (9)   

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