KEGG   Lachancea thermotolerans: KLTH0B09900g
Entry
KLTH0B09900g      CDS       T01117                                 
Name
(RefSeq) U2-type spliceosomal complex subunit CWC22
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
lth  Lachancea thermotolerans
Brite
KEGG Orthology (KO) [BR:lth00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lth03041]
    KLTH0B09900g
Spliceosome [BR:lth03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    KLTH0B09900g
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    KLTH0B09900g
SSDB
Motif
Pfam: MA3 MIF4G HEAT_5MP1_2 Phage_PBS1_ring
Other DBs
NCBI-GeneID: 8291061
NCBI-ProteinID: XP_002552217
UniProt: C5DDB8
Position
B:complement(823250..825040)
AA seq 596 aa
MSQEDQDVVILQKESWDHLKSYIKQCFRSLTRSSVVEEYRKLFAVNILWGERLVVSSVLQ
KQSAGDSSEILAALTSLLNAHIPQLGELLIEETTSRFLNAFKTHNSKGCYAMAALIAELF
NYEVLHEILILQILHLLMEGVNVDSACLAMFVLSKCGRQLMLVAKTAHDLAFESLRKFFQ
ENKVERAVYRRFEDLFDLRKRNYPQLSKRIHLPDHETVTHTFLLDLESSTPSSDESLEEF
RYDRNFMEKESEIETLRSKLFALEGTDATPDEQRPAEDKTQSRELEMKKKIYLTLKGSLS
GDEAAHKILKYKFPDSEKKAVVDILVTACSQETTYSKFYGIVAERLCSSHKSWKAAFGQS
FHDNYSAVDEFQANQVRNMGKFWGHILASDYLGFEVFESVHMNANETSSAGRVYLKFLFQ
ELVLDLSIDTLQARLDEPYIQPFLVNLFPKDDAEKSRFSINYFTAIGLGRLTEGMRQALA
DMEKKVVALQDTEAESGSSLFSRRGSSSSPKTKAYIQGERASSETDNSHSLERSYRRPQD
EEFSQTRYSESLTRSRTSVRRRSRTPTRRRSRTPTRRRSRTPARRRSRSPNTRFGP
NT seq 1791 nt   +upstreamnt  +downstreamnt
atgagccaagaagaccaagatgttgttatactccaaaaagaaagctgggatcatctcaag
agttacataaagcagtgttttcgaagtttgacgagatcctcagttgttgaagaataccga
aaattattcgcggttaatattctttggggagagagattagttgtttcttccgttttgcaa
aaacaatcagcaggagattctagtgagatactggcagcattaacaagcttgcttaatgca
catataccgcaacttggtgagcttttaatcgaagaaactacatctagatttctcaatgcg
tttaaaacacataattccaaagggtgctatgccatggctgccttgatagcagaactcttc
aactatgaggttcttcacgaaatactaattcttcagatccttcaccttttgatggaaggt
gttaacgtggactctgcgtgccttgcaatgtttgtgctaagcaaatgcgggcgacaactg
atgctcgtggcgaaaacagcacacgatcttgcgttcgaaagcttgagaaagtttttccaa
gagaacaaagttgagagggctgtttacagacgttttgaggatttgtttgacctccgtaaa
agaaactatcctcagctttcaaaaagaatacatttgcctgaccacgaaactgtaacccac
acttttctactagatctagagagtagtactccgtcatcagacgaaagcttggaagaattc
agatatgaccgaaattttatggaaaaagaatctgaaatagagacactaaggtcaaagctt
tttgccttggaaggaacagatgctactcccgatgaacaaagacctgctgaagacaaaacg
caaagccgagaattagaaatgaaaaagaaaatctatcttactttgaaaggctccttgtct
ggagatgaggcggctcacaaaattctgaagtacaagtttcctgattccgagaagaaagca
gttgttgatatattggtcactgcttgttcgcaagaaacgacttattccaaattttatggc
attgtcgctgaaaggctgtgttcaagtcataaaagttggaaagcggcgttcgggcaatct
tttcatgataactactcagctgttgatgaattccaagccaaccaggtacgaaacatgggg
aaattttgggggcatatcttagcgtctgactatcttggtttcgaagtttttgaatcagtt
cacatgaatgcaaatgagacaagctcggcgggaagagtttacctcaaatttctgtttcaa
gaactcgttttggacttaagcatcgacaccctgcaggcgcgtttagacgaaccgtatatt
cagcctttcttggtcaacctttttccaaaagacgatgcagagaaaagtaggttttcaatc
aattattttacggctataggtcttggtcggttgacagaaggcatgcgacaagcgcttgca
gatatggagaaaaaagtggtagctttacaagacacagaggcagagtcaggatcctctttg
tttagcagacggggatcttcatcgagcccaaaaaccaaagcatatatccaaggtgaacgg
gccagcagcgagactgataattcacattcgttagaacgtagttatagaagaccccaggat
gaagagttctcgcaaacccgatattcagagagtctcacacgttcaagaacatcggttcgg
agaagatcgaggacccctacgaggcggagatcgaggacccctacgaggcggagatcgagg
acccctgcgaggcgaagatctcgatcacccaacactcgtttcgggccataa

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (10)   

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