KEGG T10897: O0236

Lentilactobacillus terminaliae: O0236_002750

Entry

O0236_002750      CDS       T10897

Name

(GenBank) DNA-directed RNA polymerase subunit alpha

K03040

DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]

Organism

ltm Lentilactobacillus terminaliae

Pathway

ltm03020

RNA polymerase

Brite

KEGG Orthology (KO) [BR:ltm00001]
09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    O0236_002750
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ltm03021]
    O0236_002750
   03400 DNA repair and recombination proteins [BR:ltm03400]
    O0236_002750
Enzymes [BR:ltm01000]
2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     O0236_002750
Transcription machinery [BR:ltm03021]
Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     O0236_002750
DNA repair and recombination proteins [BR:ltm03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      O0236_002750

SSDB

Motif

Pfam:

RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L HHH_5 SAM_EPH

Other DBs

NCBI-ProteinID:

XFD40247

Position

558266..559216

AA seq 316 aa
MIEFEKPNIHKIEENDNYGEVVVEPLERGYGTTLGNSLRRTLLSSLPGAAVTSIQIDNVL
HEFSTIKGVVEDVTQIILNVKKISLKLDGPEDEEENLEIDVIGPADVTAGDIVGDSDVTV
LNPDLHIATVAEGTNFHMRLTANRGRGYVSAVENKQRSSEMPIGVLPVDSIYTPIERVNY
QVESTRVGQRDDFDKLTLDVWTNGSITPSEAVSLAAKILTEHLEMFVDLTDEAKNTEIMV
EKEETHKEKMLEMTIEELDLSVRSYNCLKRAGINTVQELTEKSEPDMMKVRNLGRKSLEE
VKEKLGALGLSLRKED

NT seq 951 nt +upstreamnt +downstreamnt
atgattgaatttgaaaagcctaacattcacaagatagaagaaaacgataactatggtgaa
gttgttgttgaaccactagaaagaggatatgggactactcttggtaactcactaagaaga
accctattgtcttctctacctggcgcagcagttactagtatccaaattgataatgtcctt
catgagttctcaaccattaagggtgttgtcgaagatgtcactcagattatcttaaatgtt
aagaaaatttcattaaaattagatggacctgaagacgaagaagagaacttagagattgat
gttattggacctgctgatgttacagctggtgatattgttggggatagcgacgtaactgtt
ttaaatcctgatcttcatatcgctacggttgctgagggaactaatttccatatgcgacta
actgctaacagaggccgtgggtatgtttctgccgttgaaaacaaacaacgtagctcagag
atgcctattggtgtacttcccgtcgattctatttataccccaattgaacgtgtcaactat
caagttgagagtacccgggttggtcaacgtgatgactttgataagcttactttagatgtt
tggactaatggttcaatcactccaagtgaggctgttagtttagctgctaagattctaact
gaacatcttgagatgtttgttgatcttactgatgaagctaagaatacagagatcatggtc
gaaaaagaagaaacacacaaagaaaagatgctcgaaatgactattgaagaacttgattta
tcagttcgttcatataattgtcttaagcgtgcaggcattaatactgttcaagagttaact
gaaaaatctgaacctgacatgatgaaagttcgtaacttaggacgtaagtcattggaagag
gttaaagagaaactcggtgctttaggtttatcacttcgtaaagaagactaa

All links

Gene (1)   
   NCBI-PROTEINID (1)   
Protein domain (5)   
   Pfam (5)   
All databases (6)   

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