KEGG   Limnobacter thiooxidans: RGQ30_00550
Entry
RGQ30_00550       CDS       T09704                                 
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
  KO
K03500  16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
Organism
lto  Limnobacter thiooxidans
Brite
KEGG Orthology (KO) [BR:lto00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lto03009]
    RGQ30_00550 (rsmB)
Enzymes [BR:lto01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.176  16S rRNA (cytosine967-C5)-methyltransferase
     RGQ30_00550 (rsmB)
Ribosome biogenesis [BR:lto03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    RGQ30_00550 (rsmB)
SSDB
Motif
Pfam: Methyltr_RsmB-F RsmF-B_ferredox FtsJ Methyltransf_31 Methyltransf_25 FD_BcsB_1st NusB
Other DBs
NCBI-ProteinID: BET24554
UniProt: A0AA86M7T5
Position
59392..60756
AA seq 454 aa
MMNTKPPKLAEASLAFALLKAAAVLTRVLREGRSLDQAIAQETKGVKTPQALGAIQDLAY
FGMRHLGQGQVLTRLISGKPLLSPEPLNELMALGFGLLWEGKNPKYPAHTVVDQMVYACT
GSEQFARAKGLANACLRNFLRDANTWRTKALEDPLAQHNLPVWWVEQLKAGHPEQWQTVL
AQAQSHPPLVVRVNSRCMTAQAYSDQLNAAGMAASVIGPQAVWIEKPVPVSSLPGFELGH
VSVQDSAAQMAAPLLNPQNGQRILDACAAPGGKTGHLLELADIDLVALDSSPHRLDRVED
NIRRIAPTLTGQWNLKLKVAQAEQLESWWDGVPFDGILADVPCTGSGVVRRHPDIPWLRR
PDDVAKLSRLQHKLLNALWSTLKPGGTLLLVTCSIFPEEGPQLAAAFQDNHPDAVAHAAP
GLVLPTSSTGSDNAGFEASPDGFFYAKFEKSPIS
NT seq 1365 nt   +upstreamnt  +downstreamnt
atgatgaatacgaagccgccaaagctggctgaagcaagccttgcctttgcactgttgaaa
gcagcagccgttctaacccgtgtattgcgtgagggtcgttcacttgatcaggccattgcc
caggaaaccaagggtgtgaaaactccccaggcattgggtgccattcaggacctggcctat
ttcggcatgcgccacctgggtcagggccaggttcttacccgcctgatcagcggaaagccc
ttgttgagcccggaacccttgaatgagttgatggcccttggtttcggtttgttgtgggaa
ggcaagaacccgaagtaccctgcgcacacggtggtggatcagatggtgtatgcctgcacc
ggcagcgaacagtttgcgcgcgcaaaaggcctggccaacgcttgcctgcgaaactttcta
cgtgatgcaaacacctggcgaaccaaggcgcttgaagacccactggcccagcacaacttg
ccagtgtggtgggtagaacaactcaaggcgggtcaccctgaacaatggcaaacggtgctt
gcacaagcccaaagccatccacccctggtggtgcgtgtcaacagccgttgcatgacggcc
caggcctattcggaccaattgaatgccgctggcatggccgcatcggtgatcggtccacag
gccgtgtggattgaaaaaccggtgcccgtgtcgtccctgcccggcttcgagcttgggcac
gtgtcggtacaggacagcgccgcccaaatggctgcacctttgctgaacccccagaatggt
cagcgaattctggatgcttgcgctgcgccaggtggaaagacaggccatttgctggaactg
gcagacattgacctggtggcactcgattcaagcccgcaccgactggaccgcgttgaagac
aacattcgccgcattgcccccaccttgactgggcaatggaacctgaagctgaaggtggct
caggccgagcaactggagagctggtgggacggtgtgcccttcgacggcattctggcggac
gtgccttgcactggttcaggtgtggtgcgccgtcacccggatatcccatggttgcgcaga
ccggacgatgtggccaagttgtcgcgcttacaacacaaattactgaatgccttgtggtct
acgctaaagccgggcggtacacttttgctggtgacgtgttccatctttcctgaagagggc
ccccagttggcagcagctttccaagacaaccatcccgatgcggtggcccatgcggcgccc
ggtttggtattgccaaccagttcaacgggcagcgacaacgctggattcgaagcgtcaccc
gatggctttttctacgccaagttcgaaaaatctcccatcagttga

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (9)   

Download RDF
DBGET integrated database retrieval system