KEGG   Leuresthes tenuis (California grunion): 140319045
Entry
140319045         CDS       T11698                                 
Symbol
cwc22
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog isoform X1
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
ltu  Leuresthes tenuis (California grunion)
Brite
KEGG Orthology (KO) [BR:ltu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ltu03041]
    140319045 (cwc22)
Spliceosome [BR:ltu03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    140319045 (cwc22)
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    140319045 (cwc22)
SSDB
Motif
Pfam: MA3 MIF4G Cnd1
Other DBs
NCBI-GeneID: 140319045
NCBI-ProteinID: XP_072252666
Position
Unknown
AA seq 975 aa
MDSPSTSPNPSPGRREHSEDDSDPAKAVETSQKSPKGQTSPQTSPKGDDPSSSSGSSSSS
DEEDEHEGALRKIRSSVAQIKRSRSREQDRSRSSEKDRSRSKERDQSRSWENDRSKSREK
DGSKTIERDRSRSRENDRDRSRSRSRGRDRSRSRGRDRSRSRSRSRGRDRSRSRSRSRSR
GRDRSRDRFERDRNKERFDRRRYARDRYDDRRDDRNGRFDRRAYRDAESDHRRRGRSASP
TSDKEPASTNEPPVKKKKEEIDPILTRTGGAYIPPAKLRMMQQQISDKSSLAYQRMSWEA
LKKSINGLINKVNVSNLVNIIQELLQENIVRGRGLLARSVLQAQAASPIFTHVYAAVVAI
INSKFPQIGELILKRLILSFRRSYRRNLKQQCLTASKFVAHLINQNVAHEVLCLEMLTLL
LERPTDDSVEVAISFLKECGLKLTEVSPRGINAIFERLRNVLHESSIDKRVQYMIEVMFA
IRKDGFKDHPVIPEGLDLVDDDDQFTHMLPLEDEYNTEDILNVFKLDPDFLENEEKYKTI
KRDILDEGSSDSGEDGDGSDEDEDDEEGNEEEGEDEKVTIFDKTEVNLVAFRRTIYLAIQ
SSLDFEECAHKLIKMDFPDSQTKELCNMILDCCAQQRTYEKFFGLLAGRFCLLKKEYMES
FEAIFTEQYDTIHRLETNKLRNVARLFAHLLYTDSVPWSVLECIRMSDETTTSSSRIFVK
ILFQELCAYMGLPKLNQRLKDQTLQPFFEGLFPRDNPRNTRFAINFFTSIGLGGLTDELR
EHLKNAPKMIMTQKQEVESSDSSSSSSSSSSSSDSSSSDSSSESDSDSSDSSSSSSSDSD
NKHRKKKKRRGQSEERKNKKGKDKKRKDKPEKRRDRRNNDQEEDDGEKQARRDKRGHARD
MDERAHEEPRRSRRDDRLEEEERREEEERRRKTGRQRDGERDRARERESGQERDRERNKE
NRDRNREREERRKRR
NT seq 2928 nt   +upstreamnt  +downstreamnt
atggactctccaagcacaagtccaaatcccagtcctggacggagagaacacagtgaggat
gattcggatccggccaaggcggtggagaccagccagaaaagccccaaagggcaaacatct
cctcagaccagtccgaaaggtgatgatccttccagcagctcaggcagcagcagcagcagt
gatgaggaggatgaacatgaaggcgcactgaggaagataagaagcagtgtggctcagatc
aaaagatccaggtccagagagcaagaccgatccaggtctagtgaaaaagacagatccagg
tccaaagagagagatcagtccaggtcctgggaaaatgatagatccaagtccagagagaaa
gacggatccaagaccatagagagagaccgatcacgatccagagaaaatgatagagacaga
tctagatccagatccaggggaagagacagatccagatccaggggaagagacagatccagg
tccaggtccagatccaggggacgagacagatccaggtccaggtccaggtccagatccagg
ggacgggaccgatctagagaccgatttgagagagaccggaacaaagaacgctttgacaga
agacgctatgctcgggatcgctatgatgatcggcgcgatgacaggaacgggcgttttgac
aggcgagcctacagggatgcagagtcagatcacaggaggaggggtcgctcggcctcccca
acttctgataaggaaccagcttcaactaatgagccaccggttaagaagaaaaaggaggag
attgatccgatcctgaccaggactggcggtgcttacattccccctgccaagctgcgcatg
atgcagcagcaaatcagtgacaagagcagcctggcctatcagaggatgagctgggaagct
ctgaagaagtccatcaacggtctgatcaacaaagttaacgtgtccaaccttgtcaacatt
atccaggagttgctgcaggaaaacattgtcagggggaggggtctgctggctcgttcagtg
ttgcaggctcaagcagcttctcccatcttcactcacgtctacgctgctgtcgtcgccatc
atcaactcaaagttccctcagattggagagctgatcctcaaacgcctcatcctgtccttt
aggaggagctaccgccgcaatctcaagcaacagtgcctgacagcctcaaagtttgtggct
catctcatcaaccagaatgtggcccatgaggttttgtgtctggagatgctcactctgctt
ctggagcgtcccactgacgacagcgtggaagtcgccatctccttcctgaaggagtgtgga
ctcaaattgactgaggtctcccccagagggatcaatgccatatttgagcgtctcaggaat
gtcctccacgagtcgtctattgataaaagggtccagtacatgatcgaggtgatgttcgct
atcaggaaggatggttttaaagatcatcctgtgatcccagaaggcctggacttggtggac
gacgacgaccagttcacccacatgctgccgctggaggacgagtacaacaccgaagatatc
ctcaacgtgttcaagttggatccagacttcctggagaatgaggagaagtacaaaactatt
aaaagagatatcctggatgagggcagcagcgattcaggggaggatggagacggcagcgac
gaggatgaggacgatgaagaagggaatgaggaggagggagaagatgagaaggtcaccatc
tttgacaagactgaagtcaacctggttgctttcagaagaaccatctatcttgctatacag
tccagcttggactttgaggaatgcgctcacaaactgattaagatggactttcctgacagc
cagaccaaagaactgtgtaacatgatcctggactgctgcgctcaacagaggacctatgag
aagttcttcggtctgctggctgggaggttttgtctgttaaagaaagaatacatggagagc
tttgaggcaatatttacagagcagtatgacacgattcaccggttggagaccaacaaactg
aggaacgtggcccgactgttcgctcatctgctctacacagactctgtaccatggagtgtg
ttggagtgcatccggatgagtgatgagaccacaacgtcatccagcaggatttttgtgaaa
atccttttccaggagctttgtgcctacatgggccttccaaaactcaaccagagactgaaa
gaccagacacttcagccattctttgagggtctctttcctcgcgataaccccagaaacact
cgctttgccatcaactttttcacctctattggacttggaggactgacggatgagttaagg
gaacacttgaagaatgcgccgaagatgatcatgactcagaaacaggaagttgaatcctct
gactcctcgtcatcttcgtcctcctcttcttcctcatcagactcctcctcctcagactcc
tccagcgaatcagattcagactcctcagactcatcctccagcagcagctcagattctgac
aacaaacacagaaagaaaaagaagaggagaggccaaagtgaggagaggaagaacaagaaa
ggaaaagacaagaagaggaaagacaaacctgagaagaggcgagacagacgcaacaacgat
caagaagaggatgacggtgagaagcaggccaggagggacaagagaggccatgctcgtgat
atggatgagcgtgcacatgaggaaccccgacggagcagacgagatgacaggttggaggaa
gaggagcggcgggaggaagaggagcggagacgaaaaacaggcagacagcgagacggcgag
cgagacagagcaagggagagggagagtggacaagagagggatagagagaggaacaaagag
aacagagacaggaacagagagcgagaggagaggaggaagaggagatag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (9)   

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