KEGG   Lytechinus variegatus (green sea urchin): 121407826
Entry
121407826         CDS       T11173                                 
Name
(RefSeq) tubulin beta chain-like
  KO
K07375  tubulin beta
Organism
lvg  Lytechinus variegatus (green sea urchin)
Pathway
lvg04145  Phagocytosis
lvg04517  IgSF CAM signaling
lvg04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:lvg00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    121407826
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    121407826
  09142 Cell motility
   04814 Motor proteins
    121407826
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lvg03036]
    121407826
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:lvg04812]
    121407826
   04147 Exosome [BR:lvg04147]
    121407826
Chromosome and associated proteins [BR:lvg03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     121407826
Cytoskeleton proteins [BR:lvg04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    121407826
Exosome [BR:lvg04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   121407826
  Exosomal proteins of colorectal cancer cells
   121407826
  Exosomal proteins of bladder cancer cells
   121407826
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 121407826
NCBI-ProteinID: XP_041454991
Position
2:complement(30900085..30903353)
AA seq 447 aa
MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV
PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQHMFDAKNMM
AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEEGEFDEEEGEDEEAA
NT seq 1344 nt   +upstreamnt  +downstreamnt
atgcgtgaaattgtccacatccaagccggacagtgcggaaaccagattggtgccaagttc
tgggaagtgatctcagatgagcatggcatcgaccctactggtacctaccatggagactct
gatcttcagctggagagaatcaacgtctactacaatgaggctacgggaggcaaatatgta
ccacgtgccgtcctcgtcgatctggagccaggtaccatggactccgtccgctctggacct
ttcggacagatcttcagaccagacaactttgtctttggacagagtggtgctggaaacaac
tgggccaagggacattacaccgaaggtgctgagcttgtagactctgtgcttgatgttgtt
cgcaaggaggctgagagctgtgattgtcttcagggcttccagcttactcactcccttgga
ggtggtaccggctctggaatgggaaccctcctcatcagcaagatccgtgaagagtaccca
gaccgcatcatgaacacattcagcgttgtgccatcacccaaagtatcagacactgttgtt
gaaccatacaacgccacactctcagtccatcagttggttgagaacacagacgagacctat
tgcattgacaatgaagccctctacgatatctgcttccgtaccctcaagctgaccacaccc
acttacggagatctgaaccatctggtctctgccaccatgagtggtgtcaccacctgcctc
cgattccctggccaactcaacgctgatctccgcaaacttgctgtcaacatggttcccttc
ccacgtcttcacttcttcatgcctggctttgctcctctcactagccgtggcagccagcaa
taccgtgccttgaccgttccagagctcacccaacatatgttcgatgccaagaacatgatg
gctgcctgtgatcctcgtcatggtcgttacctcaccgttgccgccatcttccgtggccgt
atgtccatgaaggaggtcgatgaacagatgctcaacgtacagaacaagaacagcagctac
ttcgttgaatggatccccaacaacgtcaagaccgctgtctgtgacatcccaccacgtggt
ctgaagatgtctgccactttcattggcaacagcactgccatccaggagctcttcaagcgt
atctctgagcagttcaccgctatgttcaggagaaaggctttccttcattggtacactggt
gagggtatggacgagatggagttcactgaggctgagagcaacatgaatgacttggtttct
gagtaccaacagtaccaggatgccaccgctgaggaggaaggagagtttgacgaggaagaa
ggtgaagatgaggaggctgcttaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (11)   

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