KEGG   Lytechinus variegatus (green sea urchin): 121427346
Entry
121427346         CDS       T11173                                 
Name
(RefSeq) tubulin beta chain-like
  KO
K07375  tubulin beta
Organism
lvg  Lytechinus variegatus (green sea urchin)
Pathway
lvg04145  Phagocytosis
lvg04517  IgSF CAM signaling
lvg04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:lvg00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    121427346
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    121427346
  09142 Cell motility
   04814 Motor proteins
    121427346
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lvg03036]
    121427346
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:lvg04812]
    121427346
   04147 Exosome [BR:lvg04147]
    121427346
Chromosome and associated proteins [BR:lvg03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     121427346
Cytoskeleton proteins [BR:lvg04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    121427346
Exosome [BR:lvg04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   121427346
  Exosomal proteins of colorectal cancer cells
   121427346
  Exosomal proteins of bladder cancer cells
   121427346
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 121427346
NCBI-ProteinID: XP_041479628
Position
14:complement(28784896..28797083)
AA seq 445 aa
MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV
PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDESFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRSLTVPELTQQMFDAKNMM
AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEEGEFEEEEGEEEA
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgcgtgaaattgtgcatatccaagctggacaatgcggcaaccaaatcggggcaaagttc
tgggaggtgatctctgatgaacacggcatcgaccctaccggtacctaccatggcgactct
gacctccagctcgagcgcatcaacgtctactacaatgaggctaccggcggcaagtacgtt
ccccgagccgtgctcgtcgatctcgagccaggcaccatggactcggtccggtcaggtcca
tttggtcagatcttcagaccagataatttcgtctttggccagagcggagcagggaacaac
tgggccaagggtcactacacagagggcgctgaacttatcgattctgtgctagatgttgtc
aggaaagaagcagaaagctgtgactgtcttcagggattccaactgacccattcgcttggc
ggaggcactggttctggcatgggaacccttctgatcagcaagatccgtgaggaataccca
gaccgcatcatgaacacattcagcgtggtgccatctcctaaggtatctgacacagttgtt
gaaccttacaacgctaccctatccgtccatcagctcgtagaaaacacagatgaatctttc
tgcatcgacaacgaagccctctacgacatctgcttccgtaccctgaagctcaccacaccc
acctatggtgatctgaaccatcttgtctctgcaaccatgagtggtgtcacaacctgcctc
cgattccctggccaactcaacgccgatctccgcaaacttgccgtcaacatggttcccttc
ccacgtcttcacttcttcatgcctggctttgctcctctcactagtcgtggtagtcagcag
taccgttccctcaccgtacccgagcttacccaacagatgttcgatgccaagaacatgatg
gctgcctgtgatcctcgacatggacgctacctgaccgttgctgcaatcttccgcggtcgt
atgtccatgaaggaggttgacgaacagatgctcaatgtccagaacaagaacagcagttac
ttcgtagaatggatcccaaacaatgtcaagaccgctgtctgtgacatccctccccgtggt
cttaagatggctgccactttcattggcaatagcaccgccattcaagaacttttcaagcgt
atctctgagcagttcaccgctatgttcagacgaaaggccttccttcattggtacactggt
gagggtatggacgagatggagttcactgaagctgagagcaacatgaatgacttggtgtct
gagtatcagcagtaccaggacgccaccgcagaagaagagggcgagtttgaagaggaagaa
ggggaagaagaagcatga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (9)   

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