KEGG   Lytechinus variegatus (green sea urchin): 121428185
Entry
121428185         CDS       T11173                                 
Name
(RefSeq) tubulin beta chain-like
  KO
K07375  tubulin beta
Organism
lvg  Lytechinus variegatus (green sea urchin)
Pathway
lvg04145  Phagocytosis
lvg04517  IgSF CAM signaling
lvg04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:lvg00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    121428185
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    121428185
  09142 Cell motility
   04814 Motor proteins
    121428185
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lvg03036]
    121428185
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:lvg04812]
    121428185
   04147 Exosome [BR:lvg04147]
    121428185
Chromosome and associated proteins [BR:lvg03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     121428185
Cytoskeleton proteins [BR:lvg04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    121428185
Exosome [BR:lvg04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   121428185
  Exosomal proteins of colorectal cancer cells
   121428185
  Exosomal proteins of bladder cancer cells
   121428185
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_2 Tubulin_3
Other DBs
NCBI-GeneID: 121428185
NCBI-ProteinID: XP_041480722
Position
14:complement(28762575..28770721)
AA seq 444 aa
MREIVHVQAGQCGNQIGAKFWEVISDEHGIDPTGSYQGDSDLQLERINVYYNEASGGKYV
PRAVLLDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVMDVV
RKESEGCDCLQGFQLTHSLGGGTGSGMGTLLITKIREEYPDRIMTTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALSVPELTQQMFDAKNMM
AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMAATFIGNSTAIQELFKRICEQFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEEDFDDEEEEEAQ
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgcgtgagatcgtccacgtacaagcaggccagtgcggcaaccagatcggtgccaagttc
tgggaagtgatttctgatgaacatggaatcgatcctactggttcgtaccaaggcgactct
gatctccaactcgagcggatcaacgtctactacaacgaggcctccggaggaaaatatgtc
ccgagggcagttctactcgacctcgagccaggcaccatggactcagtccggtcaggtccc
tttggtcagatcttcagaccagataacttcgtctttggacagagcggagcagggaacaac
tgggcgaagggacattacacagagggcgctgaactgattgattcagtaatggatgttgtt
cgaaaggagtcagaagggtgcgactgtcttcaggggttccaattgacgcattccttggga
ggcgggactggttctggaatgggaaccctcctaatcaccaagatccgtgaggaatatcca
gaccggatcatgaccaccttcagcgttgttccctcaccaaaggtgtcggacactgtcgtc
gaaccttacaacgccacattgtccgtccatcagcttgtcgagaataccgatgagacgttc
tgcatcgacaacgaagccctctacgatatctgcttccgtacactgaagctcaccacaccc
acctatggcgacttgaatcatcttgtctctgcaaccatgagtggtgtcaccacctgcctc
aggttccctggtcagttgaatgcagatctgcgtaagctagcggtcaacatggttcccttt
cctcgtcttcatttcttcatgcctggctttgctcctctgacaagccgtggtagccagcaa
tatcgcgccctctcagttcctgaactgacccaacagatgtttgatgccaagaacatgatg
gccgcctgtgaccctcgtcacggacgctacctgactgtcgccgcaatcttccgtggtcgt
atgtcaatgaaagaggttgacgaacagatgctcaatattcagaacaagaacagcagttac
ttcgtcgaatggatccccaacaacgtgaagactgctgtctgtgacatccctccccgtggt
ctgaaaatggctgccaccttcatcggcaacagcaccgccatccaggagctattcaaacgc
atttgtgagcagttctccgccatgttcagacgtaaggccttccttcattggtacactggt
gagggtatggacgagatggagttcactgaagctgagagcaacatgaatgacttggtgtcc
gagtaccagcagtaccaggacgccacggcagaagaggaggattttgatgatgaagaggaa
gaagaagcgcaataa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (9)   

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