KEGG   Lysobacter yananisis: RDV84_12315
Entry
RDV84_12315       CDS       T09342                                 
Symbol
murF
Name
(GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
  KO
K01929  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
Organism
lya  Lysobacter yananisis
Pathway
lya00300  Lysine biosynthesis
lya00550  Peptidoglycan biosynthesis
lya01100  Metabolic pathways
lya01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:lya00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    RDV84_12315 (murF)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    RDV84_12315 (murF)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    RDV84_12315 (murF)
Enzymes [BR:lya01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.10  UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
     RDV84_12315 (murF)
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase_C Mur_ligase
Other DBs
NCBI-ProteinID: WMT05587
Position
2903113..2904510
AA seq 465 aa
MKRLSLSEIARLTGGRLRGDDGGRESTIDVVCTDTRALPAQGAALFVALKGERFDGHDHV
AGLAHTAVAAALVSREIDAPIAQVIVADTQQALADLAAGVQAQRAGNTVVAITGSNGKTS
VKALTAAILERAGKTYATPGNRNNEIGLPLAVLDAPEDARYSIYEMGAGKPGDIAYLVRV
ARPDVSLVNNIAPAHLERMGSLLGIADTKAAIYDALADGGVAAINADDAFAPYFEQRAAG
RRVIRFGLDASAEVTARDVRVAPEGSTFTLVAPQGEAQIALKLVGRHNVRNALAAASLAL
GAGVSLQHIADGLNAAQPVDGRLITHRLPGGAVLIDDSYNANPGSTGAAIDTLAEMGGEN
WLVLGAMREIGDEEIAMHAEIGRRAKAAGLRRLYALGELPAAAAAAFGDGARTFASHDEL
AAALAAELAAGVRVLVKGSHSSAMDKIVTALLSAHRPGEGTTHVA
NT seq 1398 nt   +upstreamnt  +downstreamnt
atgaagcgcttgagcctcagcgagatcgcgcgcctcaccggcggccgcctgcgcggcgac
gacggcggtcgagagagcacgatcgacgtcgtatgcaccgacacccgcgcgctgccggcg
caaggcgcggcgctgttcgtcgcgctcaagggcgagcgcttcgacggccacgaccatgtc
gccgggctggcccacaccgcggtcgccgcggcgctggtgtcgcgcgagatcgacgcgccg
atcgcccaggtgatcgtcgccgacacccagcaggcgctggccgatctcgccgccggcgtg
caggcgcagcgcgccggcaacaccgtggtcgcgattaccggcagcaacggcaagaccagc
gtcaaggcgctgaccgcggcgatcctggagcgcgccggcaagacctacgcgaccccgggc
aaccgcaacaacgagatcggcctgccgctggcggtgctcgacgcgcccgaagacgcgcgc
tattcgatctacgagatgggcgccggcaagcccggcgacatcgcctatctggtgcgggtg
gcgcggcccgacgtgtcgctggtcaacaacatcgcgccggcgcacctggagcgcatgggc
agcctgctcggcatcgccgacaccaaggcggcgatctacgacgcgctggcggacggcggc
gtcgcggcgatcaatgccgacgacgcgttcgcgccttatttcgagcagcgcgcggccggt
cgccgcgtcatccgcttcggtctggacgccagcgccgaggtcaccgcgcgcgacgtgcga
gtggcgccggaaggttcgaccttcaccttggtcgcgccgcaaggcgaggcgcagatcgcg
ctgaagctggtgggccgccacaacgtccgcaacgccctggccgccgcgtcgctggcgctc
ggcgcgggcgtgtcgctgcagcacatcgccgacggcctcaacgctgcgcagccggtcgac
ggccgcctgatcacccaccgcttgccgggcggcgcggtgctgatcgacgacagctacaac
gccaacccgggctcgaccggcgcggcgatcgacacgctcgcggaaatgggcggcgaaaac
tggttagtgctcggcgcgatgcgcgagatcggcgacgaagaaatcgccatgcacgccgag
atcggccgccgcgccaaggccgccggcctgcgccggctgtacgcgctgggcgagctgccg
gccgcggccgccgccgcgttcggcgacggcgcgcgcacgttcgccagccacgacgaactg
gctgcggcgctggccgcggagctcgccgccggcgtgcgggtgttggtgaaaggttcgcac
agcagtgcgatggacaagatcgtgacggcgttgttgtcggcacaccggccgggggagggc
acgacgcatgttgcttga

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein domain (3)   
   Pfam (3)   
All databases (4)   

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