KEGG   Protaetiibacter intestinalis: D7I47_13495
Entry
D7I47_13495       CDS       T05661                                 
Name
(GenBank) type IIA DNA topoisomerase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
lyd  Protaetiibacter intestinalis
Brite
KEGG Orthology (KO) [BR:lyd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lyd03032]
    D7I47_13495
   03400 DNA repair and recombination proteins [BR:lyd03400]
    D7I47_13495
Enzymes [BR:lyd01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     D7I47_13495
DNA replication proteins [BR:lyd03032]
 Prokaryotic type
  DNA Topoisomerases
   D7I47_13495
DNA repair and recombination proteins [BR:lyd03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      D7I47_13495
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c
Other DBs
NCBI-ProteinID: AYF99168
UniProt: A0A387BBT2
Position
complement(2861862..2863934)
AA seq 690 aa
MTDYSARHLSVLEGLEAVRKRPGMYIGTTDSRGLMHCLWEIIDNSVDEALGGFGDRIEVI
LHADESVEVRDRARGIPVDIEPKTGLSGVEVVFTKLHAGGKFGGGSYAASGGLHGVGASV
VNALSERLDVEVDRDGKTWAMSFHRGEPGVFADAGAPTPDAPFTPFVSGSELRVVGKVAK
GVTGTRIRYWADRQIFTKGAGFQTEELFGRARQTAFLVPGLGLEIRDDRGEQPQVESFRF
DGGISEFVDHLAPDAGVTDTWRIQGFGGYTETVPVLQENGHMVPTELTRQCEVDLALRWG
TGYDTVMRSFVNIIATPKGGTHQLGFEQGLLKFLRAEVEKNARRLKAGSDKLEKDDVLAG
LTAVLTVRIPEPQFEGQTKEVLGTPAIRAIVASVVGRGLQERFASTKRDDKTQSALVLDK
VVAEMKSRISARAHKETQRRKNALESSSLPAKLVDCRSNEVADTELFIVEGDSALGTAKL
ARDSEHQALLPIRGKILNVQKASVADMLGNAECASIIQVIGAGSGRSFDLEAARYGKVII
MSDADVDGAHIRTLLLTLFFRYMRPMIEDGRVFAAVPPLHRVVVVNPGSKPNDILYTYSE
QELQGVLASLKKAGKSYQDPIQRYKGLGEMDADQLAETTMSRSHRTLRRVRVEDADAANR
VFELLMGNDVAPRKEFIIAGQGLDRSRVDV
NT seq 2073 nt   +upstreamnt  +downstreamnt
gtgaccgactacagcgcccgccatctctccgtgctcgaggggctggaggcggtgcgcaag
cgtcccggcatgtacatcggcacgaccgattcgcgtggcctcatgcactgcctgtgggag
atcatcgacaactccgtcgacgaggcgctcggcggcttcggcgaccgcatcgaggtcatc
ctgcacgccgacgaatcggtcgaggtgcgcgaccgggcccgcggcatccccgtcgacatc
gaaccgaagacgggactctcgggcgtcgaggtcgtgttcacgaagctgcacgcgggcggg
aagttcggcggcggctcgtacgcggcctccggcggcctgcacggcgtcggcgcctccgtc
gtgaacgcgctctccgagcggctcgacgtcgaggtcgaccgcgacggcaagacctgggcg
atgtcgttccaccgcggggagccgggcgtgttcgcggacgccggcgcgccgacccccgac
gcccccttcacgcccttcgtctcgggcagcgagctgcgcgtcgtgggcaaggtcgcgaag
ggcgtcacgggcacccgcatccggtactgggccgaccgccagatcttcacgaagggtgcc
gggttccagaccgaggagctcttcggccgcgcccggcagacggcgttcctggtgcccggc
ctcggcctcgagatccgcgacgaccgcggcgagcagccccaggtcgagagcttccgcttc
gacggcggcatctccgagttcgtcgaccacctcgccccggatgccggggtcaccgacacc
tggcgcatccagggcttcggcggctacaccgagacggtgcccgtgctccaggagaacggc
cacatggtgccgaccgagctcacgcggcagtgcgaggtcgacctggccctgcgctggggc
accggctacgacacggtcatgcgcagcttcgtcaacatcatcgccaccccgaagggcggc
acccatcagctcggcttcgagcaggggctgctgaagttcctgcgcgccgaggtcgagaag
aacgcccgccggctgaaggcgggcagcgacaagctcgagaaggacgacgtgctcgcgggc
ctcaccgcggtgctcacggtgcgcatccccgagccgcagttcgaggggcagacgaaggag
gtgctcggcacccccgccatccgcgccatcgtcgcgagcgtcgtcggtcgggggctccag
gagcgcttcgcgagcaccaagcgcgacgacaagacacagtcggcgctcgtgctcgacaag
gtcgtcgccgagatgaagtcgcgcatctcggcgcgcgcccacaaggagacgcagcgccgg
aagaacgcgctcgagagctcctcgctgcccgccaagctcgtcgactgccgctcgaacgag
gtcgccgacaccgagctgttcatcgtcgagggcgactcggccctcggcaccgccaagctc
gcccgcgactccgagcaccaggcgctgctgccgatccgcggcaagatcctcaacgtgcag
aaggcgtcggtcgccgacatgctcgggaacgccgagtgcgcctccatcatccaggtgatc
ggcgcgggctccggccgcagcttcgacctcgaggcggcgcgctacggcaaggtcatcatc
atgagcgacgccgacgtcgacggcgcccacatccgcaccctgctgctcacgctgttcttc
cgctacatgcggcccatgatcgaggacggccgggtgttcgcggccgtccccccgctgcac
cgcgtcgtcgtggtgaaccccggttccaagcccaacgacatcctctacacctactcggag
caggagctgcagggcgtgctcgcctcgctcaagaaggcgggcaagagctaccaggacccg
atccagcgctacaagggtctcggggagatggatgccgaccagctcgccgagaccacgatg
agccggtcccaccgcaccctgcgtcgcgtgcgcgtcgaggacgcggatgccgcgaaccgc
gtcttcgagctgctcatgggcaacgacgtcgcgccgcgcaaggagttcatcatcgccggg
cagggcctcgaccgctcccgcgtcgacgtgtga

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (6)   

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