KEGG   Megalobrama amblycephala (Wuchang bream): 125270651
Entry
125270651         CDS       T08212                                 
Symbol
cwc22
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-splicing factor CWC22 homolog
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
mamb  Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:mamb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mamb03041]
    125270651 (cwc22)
Spliceosome [BR:mamb03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    125270651 (cwc22)
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    125270651 (cwc22)
SSDB
Motif
Pfam: MA3 MIF4G PGA28-like_dom Cnd1 HEAT_5MP1_2 DUF7026
Other DBs
NCBI-GeneID: 125270651
NCBI-ProteinID: XP_048050456
Position
LG6:complement(37391054..37448159)
AA seq 1000 aa
MAAESNESETALNMSPTTRDEPPSPGEMEQRQRKASTSSSEDGDSDGDERRGVVDGRCNP
EAGRDEGRSGSAQPEGSGSPRAGSPVVRASSRTSGSDSDSSEDDSDDGVMHKIKSSVTHI
KRASDDESKNRQRSSSPERDEKRSQSRSRSRSHSRSRSPRERYGRGRRSRERERDRDRYG
DRDRYERRFXSRERDWEHRRRGRSGSPDKNDKPPTEEPPVKKRKEALDPILTRTGGAYIP
PAKLRMMQAQITDKSSLEYQRMSWEALKKSINGLINKVNVSNIANIIQELLQENIVRGRG
LLARSTLQAQAASPIFTHVYAAVVAIINSKFPQIGELILKRLILNFRKGYRRNDKQQCLT
ASKFVAHLINQNVAHEVLCLEMLTLLLERPTDDSVEVAISFLKECGLKLTEVSPRGINAI
FERLRNILHESEIDKRVQYMIEVMFAIRKDGFKDHPIVPDGLDLVEEEDQFTHMLPLEDD
YNTEDILNVFKLDPNFLENEEKYKTIKREILDEGSSDSGDDAGGSGDEDDDEEDEEEAAG
EEQEKVTIFDQTEVNLVAFRRTIYLAIQSSLDFEECAHKLIKMDFPESQTKELCNMILDC
CAQQRTYEKFFGLLAGRFCLLKKEYMESFEAIFQEQYETIHRLETNKLRNVARMFAHLLY
TDSVPWSVLECVKMSEDTTTSSSRIFVKILFQELCAYMGLPKLNERLKDMTLQPFFEGLF
PRDNPRNTRFAINFFTSIGLGGLTDELREHLKNAPKMIMTQNQDVESSDSSSSSSSSSDS
SSSSDSSSDSDSSDSDSGSSSDSDSSSSSDSSSDSDSRRKKASGKKKDKIKEKRSSKAAN
QRSPLEERPSKKHENRRQDGNNEDRRGPDKHQRDSRRREHRDESPPARQRGEPERGRGHK
EQQQHRHAQDYEDRQLDSRRRKDDGKNDSRADKDKDRRQSREREPLRRSRDRSKSRERSR
KEIDSRDSYRNGLERADKENRHSDRRKDERSRDGSPRRRR
NT seq 3003 nt   +upstreamnt  +downstreamnt
atggcagccgagtcaaacgagtccgagacggcattgaatatgagtcctacaaccagagat
gagcctcccagcccaggagaaatggagcagcgacagaggaaggccagcacaagttcatct
gaggatggagacagtgatggtgatgaacgcaggggagttgttgatggccggtgtaaccct
gaagcaggtagagatgagggtcgctctggttcagctcaacctgagggctctgggagtcca
cgtgcaggcagccccgtggtgagggcatcgtccaggaccagcggttcagacagtgacagc
agtgaagacgacagtgatgacggtgtaatgcacaaaataaagagcagtgtcacacatatc
aagcgtgcttctgatgatgagagcaaaaacagacaaagaagttcctcccctgagagggac
gaaaagaggtcacagtcaagatcccgctctagatctcactccagatctcgctctcctcga
gaacgttacggaagaggtcgaagatccagggagcgtgagcgtgatcgagaccgctatggc
gatcgggatcgttacgagcggcgcttcnncagcagagagagggattgggaacacaggagg
aggggaaggtcaggctccccagacaaaaatgataaacctcccaccgaggagcctccagtg
aagaagaggaaggaagcgctggaccccatcctgacccgcaccggtggggcctacatccca
ccggccaaactgcgaatgatgcaggctcagatcactgacaagagcagtttggagtatcag
aggatgagctgggaagccctgaagaagtccatcaatggtctgatcaacaaagtgaacgtt
tccaacattgccaacattattcaagagctgctgcaggagaatattgtgaggggaaggggt
cttctggccaggtctacacttcaggcccaagctgcctctcccatcttcacccatgtgtac
gctgctgtggtggccatcatcaactccaagtttcctcagatcggagaacttatcctcaag
agacttatcctcaatttccggaaaggttacaggaggaatgataaacaacaatgtctcaca
gcatccaaattcgtggctcatctcatcaaccagaatgtggcacatgaagtcctgtgcctg
gagatgttaaccctgctgttggaaagacccactgatgacagtgtggaggttgccatcagc
tttctaaaagagtgtggtctcaaattgacagaggtctctcccagaggcatcaatgccatc
tttgaacgtctgaggaacatcttgcatgagtcagagatagataagcgtgtacagtacatg
attgaggtgatgtttgccatcaggaaggatgggtttaaggaccaccccatcgtcccagac
gggcttgacctagtggaggaagaggaccagttcacacacatgcttcctctagaggatgat
tacaacacagaggacatcctaaatgtcttcaagttggatcccaacttcctggagaatgag
gagaagtacaaaacaataaaacgggaaattcttgacgaaggaagcagcgattctggcgat
gacgctggcgggagtggagatgaagacgatgatgaggaagatgaagaggaggcagctggg
gaagaacaagagaaagtcaccattttcgaccagacagaggtgaacttggttgcgttccgt
cgaacgatttacctcgccatccagtcaagcttggacttcgaagaatgcgcccacaagttg
ataaaaatggatttcccagagagccagacgaaagagttgtgcaacatgatcctggactgt
tgtgcccagcaaagaacatacgagaagtttttcggtctcctagctgggaggttttgcctg
ctgaagaaagaatacatggagagttttgaggccatcttccaggagcagtatgaaaccatc
caccggcttgaaaccaacaaacttcgtaacgttgctcgaatgtttgctcatctcctctac
acagactctgttccatggagtgtccttgaatgcgttaaaatgagcgaagacacaacgaca
tcctccagtcgaatctttgtgaagattttgttccaggaactttgcgcttacatgggtttg
ccaaaactgaacgagagactgaaagacatgactcttcagcctttcttcgagggtctgttc
ccacgtgacaacccgaggaacacaagatttgccattaatttcttcacatctatcggtctc
ggaggactgacggatgagctgagagaacatctgaagaacgctcctaagatgatcatgacc
cagaatcaggacgtggagtcatctgattcttcctcctcttcctcttcctcttcagactcc
tcctcatcttcagattcttcatctgacagtgacagcagcgacagcgactcgggctcatcc
agcgactcggactcctcctccagcagtgacagctcttcagactctgactcgaggcgcaag
aaggcctcaggcaagaaaaaggacaagatcaaggagaagaggtccagcaaggcagcaaac
cagcgatctcctctggaggagcggcccagcaaaaagcacgagaaccggcggcaagatggc
aacaacgaggaccgacgtggacccgacaaacaccagagagattctcgccgccgggaacac
agggacgagtcgccccctgctcgacaacgaggagaaccggagcgtggaagaggacacaag
gagcagcagcagcacaggcacgctcaggactatgaggacagacagctggattcacgcaga
cgcaaggacgatggcaaaaacgactcccgagcagacaaggacaaagatagacgtcagagc
cgagagagggagcctctgcggcggagccgggacaggtcaaagtcacgagagaggagccgc
aaagagatcgactccagggactcgtacagaaacggcttggagagggcggacaaagagaac
aggcattctgacaggaggaaagacgagaggagcagggatggctcaccgaggagacgcaga
tag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (10)   

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