KEGG   Mus caroli (Ryukyu mouse): 110306401
Entry
110306401         CDS       T05910                                 
Symbol
Papola
Name
(RefSeq) poly(A) polymerase alpha isoform X6
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
mcal  Mus caroli (Ryukyu mouse)
Pathway
mcal03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    110306401 (Papola)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mcal03019]
    110306401 (Papola)
Enzymes [BR:mcal01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     110306401 (Papola)
Messenger RNA biogenesis [BR:mcal03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     110306401 (Papola)
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 MTPAP-like_central RMD6 Polbeta
Other DBs
NCBI-GeneID: 110306401
NCBI-ProteinID: XP_021034172
Ensembl: MGP_CAROLIEiJ_G0018093
UniProt: A0A6P5QUB5
Position
12:100247364..100300840
AA seq 739 aa
MPFPVTTQGSQQTQPPQRHYGITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQR
RILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVA
PRHVDRSDFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPE
DLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNI
LGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVW
DPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSK
LFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQS
FPAPKESPDREEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFELD
MKIAAMHVKRKQLHQLLPSHVLQKRKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTS
AMKTSPLNSSGSSQGRNSPAPAVTAASVTSIQASEVSVPQANSSESPGGPSSESIPQTAT
QPAISPPPKPTVSRVVSSTRLVNPSPRPPGNAATTVPNPRVGVKRTSSPNKEESPKKTKT
EEDETSEDANCLALSGHDKTETKEQVDLETSAVQSETVPAPASLLASQKTSSTDLSDIPA
LPANPIPVIKNSIKLRLNR
NT seq 2220 nt   +upstreamnt  +downstreamnt
atgccgtttccagttacaacgcagggatcacaacaaacgcagccaccacagaggcactat
ggcatcacctctcctatcagcttagcagcccccaaggagactgactgcctactcacacag
aagctcatcgagacgctgaagccctttggggttttcgaagaagaagaggaactgcagcgc
aggattttaattttgggaaaattaaataacctggtgaaagaatggattcgagaaatcagt
gaaagcaagaatctcccacaatctgtaattgaaaatgttggagggaaaatttttaccttt
ggatcttacagactaggagtccacacgaaaggtgctgatattgatgccttgtgtgttgca
ccaagacatgttgatcgaagtgactttttcacctcattctatgataaattgaaattacaa
gaagaagtgaaagatttaagagctgttgaagaggcatttgtaccagttatcaaactctgt
tttgatggaatagagattgatattttgtttgcaagattagcactgcagactattcccgaa
gatttggacctacgagatgacagtctgcttaaaaacctagatataagatgcataagaagc
cttaatggttgcagggtaaccgatgaaattttacatctagtaccaaacattgacaacttc
aggttaactctgagagccatcaaactgtgggccaaacggcacaacatctattccaatata
ttaggtttcctcggtggtgtttcctgggctatgctagtagcaagaacttgccagctttat
ccaaatgcaatagcatcaactcttgtacataaatttttcttggtattttctaaatgggaa
tggccaaatccagtgctattgaaacagcctgaagaatgcaatcttaatttgcctgtgtgg
gacccaagggtaaaccccagtgataggtaccatcttatgcctataattacaccagcatac
ccacagcagaactccacgtacaatgtgtccgtttcaacacggatggtcatggttgaggag
tttaaacaaggtcttgctatcacagatgaaattttgctgagtaaggcagagtggtccaaa
ctttttgaagctccaaacttctttcagaagtacaagcattatattgtacttctagcaagt
gcgcccacggaaaagcagcgtctggagtgggtgggcttggtggaatcaaaaatccgcatc
ctggttggaagcttggagaagaatgagtttattacactggctcatgtgaatccccagtcg
tttccagcccccaaagaaagtcctgacagggaagaatttcgcacaatgtgggtgattggg
ttagtgtttaaaaaaactgaaaactctgaaaatctcagtgtcgacctcacctatgatatc
cagtctttcacagacacagtttataggcaagcaataaacagcaaaatgtttgagttggat
atgaagattgcagcaatgcatgtgaagagaaagcaactccatcagctgctgcctagtcac
gtgctccagaagaggaagaagcattcaacagaaggagtcaagttaacagctctgaatgac
agcagccttgacttgtctatggatagtgataacagcatgtctgtgccttcacccaccagt
gctatgaagaccagtccattgaacagttctggcagctctcagggcagaaacagtcctgct
ccagctgtgaccgcagcatctgtgaccagcatccaggcttctgaggtttctgtaccacaa
gcaaattccagtgaaagcccagggggtccatcgagcgaaagcattcctcaaactgccaca
cagccagccatttctccaccaccaaagcctacagtctccagagttgtctcctcaacacgc
ctggtgaacccatcgcctagacctccaggaaacgcagcaacaacagtccctaatcctaga
gtaggagtcaagagaacgtcctcacccaataaagaagaaagtcctaagaaaaccaaaaca
gaagaggatgaaacaagtgaagatgctaactgtcttgctttgagtggacatgataaaaca
gagacaaaggaacaagttgatctggagacaagtgcggttcaatcagaaactgttccggca
ccggcttctctgttggcctctcagaaaacatccagtacagacctttctgatatccctgct
ctccctgcaaatcctattcctgttatcaagaattcaataaaactgagactgaatcggtaa

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (8)   
   UniProt (1)   
   RefSeq(pep) (7)   
DNA sequence (7)   
   RefSeq(nuc) (7)   
Protein domain (7)   
   Pfam (7)   
All databases (25)   

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