KEGG   Micromonospora chalcea: PVK74_23555
Entry
PVK74_23555       CDS       T08919                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K10843  DNA excision repair protein ERCC-3 [EC:5.6.2.4]
Organism
mchl  Micromonospora chalcea
Pathway
mchl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mchl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    PVK74_23555
  09124 Replication and repair
   03420 Nucleotide excision repair
    PVK74_23555
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mchl03021]
    PVK74_23555
   03400 DNA repair and recombination proteins [BR:mchl03400]
    PVK74_23555
Enzymes [BR:mchl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PVK74_23555
Transcription machinery [BR:mchl03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     PVK74_23555
DNA repair and recombination proteins [BR:mchl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     PVK74_23555
SSDB
Motif
Pfam: ERCC3_RAD25_C Helicase_C_3 ResIII Helicase_C DEAD
Other DBs
NCBI-ProteinID: WDP98818
Position
complement(5242608..5244287)
AA seq 559 aa
MSGGPLIVQSDKTLLLEIDHPDAQACRMAIAPFAELERSPEHVHTYRLTPLGLWNARAAG
HDAEGVVDSLIKYSRYPVPHALLVDVAETMDRYGRLQLANDPVHGLVLRALDRVVLIEVA
KSKKLAGMLGAKLDDDTIAVHPSERGRLKQALLKLGWPAEDLAGYVDGEAHPIELAEAGQ
DGGKPWTLRSYQREAVEAFWAGGSGVVVLPCGAGKTLVGAAAMAEAKATTLILVTNTVAG
RQWKRELIARTSLTEEEIGEYSGERKEIRPVTIATYQVLTSRRGGAFTHLDLFGARDWGL
VVYDEVHLLPAPIFRFTADLQARRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDIEQ
QGWIAPAECTEVRVTLTDAERMAYATAEAEERYRMAATAHTKLPVVRALVDRHPDEQVLV
IGGFLDQLHQLGEYLDAPIVQGSTTNKERERLFDAFRSGSLRTLVLSKVGNFSIDLPEAA
VAIQVSGTFGSRQEEAQRLGRVLRPKADGRQAHFYTVVSRDTIDTEYAAHRQRFLAEQGY
AYTIVDADDVLGPTLPTVD
NT seq 1680 nt   +upstreamnt  +downstreamnt
gtgagcggtggaccactgatcgtgcagtcggacaagacgctgctactggagatcgaccac
cccgacgcgcaggcgtgccggatggccatcgcgcccttcgccgagctggaacgctccccc
gagcacgtgcacacgtaccggctgacgccgctgggcctgtggaacgcgcgggccgccggc
cacgacgccgagggcgtggtcgactcgctgatcaagtactcccgctacccggtgccgcac
gcgctgctggttgacgtggccgagacgatggaccggtacggccggctccagctcgccaac
gatccggtgcacggcctggtgctgcgcgcgctggaccgggtggtgctgatcgaggtcgcc
aagagcaagaagctcgccggcatgctcggcgcgaagctcgacgacgacaccatcgcggtg
cacccgtccgagcggggccggctcaagcaggcgctgctcaagctgggctggccggccgag
gacctggccgggtacgtggacggcgaggcgcacccgatcgagctggccgaggccggccag
gacggcggcaagccgtggacgctgcggtcgtaccagcgggaagccgtcgaggcgttctgg
gccggcggctccggcgtggtggtgctgccctgtggcgccggcaagacgctggtcggcgcg
gcggccatggccgaggcgaaggcgaccacgctgatcctggtcaccaacacggtggcggga
cggcagtggaagcgggagctgatcgcccgcacgtcgctgaccgaggaggagatcggcgag
tactcgggcgagcgcaaggagatccgcccggtcaccatcgccacgtaccaggtgctcacc
tcgcggcgcggcggcgcgttcacccacctggacctgttcggcgcccgcgactggggcctg
gtcgtctacgacgaggtgcacctgctgcccgcgccgatcttccgcttcacggcggacctc
caggcccgtcgccggctcggcctcaccgcgactctggtacgcgaggacggccgcgagggc
gacgtgttcagcctgatcggcccgaagcggtacgacgcgccgtggaaggacatcgagcag
cagggctggatcgccccggcggagtgcaccgaggtacgggtgacgctcaccgacgccgag
cgcatggcgtacgcgacggcggaggccgaggagcgctaccggatggcggcgaccgcccac
acgaagctgcccgtggtgcgggcgctggtggaccggcacccggacgagcaggtcctcgtc
atcggtgggttcctcgaccagctgcaccagttgggcgaatacctggacgcgccgatcgtg
cagggctccaccacgaacaaggaacgcgagcggctgttcgacgcgttccgctccggctcg
ttgcggacgctggtgctctcgaaggtcggcaacttctccatcgacctgcccgaggcggcg
gtggcgatccaggtgtccggcacgttcggctcccggcaggaggaggcgcagcggctcggg
cgggtgctgcgcccgaaggccgacgggcggcaggcgcacttctacacggtggtctcccgg
gacaccatcgacaccgagtacgccgcgcaccggcagcgcttcctggccgagcaggggtac
gcgtacaccatcgtggacgccgacgacgtgctcgggccgacgctgccgactgtcgactga

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