KEGG   Malus domestica (apple): 103430288
Entry
103430288         CDS       T03194                                 
Name
(RefSeq) nuclear poly(A) polymerase 4-like isoform X2
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
mdm  Malus domestica (apple)
Pathway
mdm03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    103430288
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mdm03019]
    103430288
Enzymes [BR:mdm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     103430288
Messenger RNA biogenesis [BR:mdm03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     103430288
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 MTPAP-like_central
Other DBs
NCBI-GeneID: 103430288
NCBI-ProteinID: XP_017186417
Position
17:join(21504790..21504924,21505018..21505095,21506211..21506318,21506523..21506585,21506686..21506847,21507440..21507553,21507671..21507733,21507831..21508160,21508281..21508445,21508539..21509323,21509922..21509946)
AA seq 675 aa
MVSSEGLSAPLSLPQVAARQYGVTKPISTAGPTEVDILRTLELEKFLVDAGLYETKEGVA
KREEVLRRIEQIVKDWVKQLTRLRGYTDQMVEDANARIFTFGSYRLGVHGPGADIDTLCV
GPSYVNREEDFFFVLHNILAEMEEVTELQPVPDAHVPVMKFKFDGISIDLLYASISLLVV
PEDLDISDVSLLYNIDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYS
NVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFS
VWDPRRYPRDRTHHMPIITPAYPCMNSSYNVSQSTLRVMVEQFCYGNKTCEEVELNRAQW
CALFEPYMFFESYKNYLQVDIIAADVDDLRAWKGWVESRLRQLTLMIERDTLGMLQCHPC
PHEYVDTNKECAHCAFFMGLQRKQGEKVQGQQFDIRGTVDGFRHSINMYMFWKPGMEIHV
SHVRRRQLPPYVYPDGCKRPRQSRVMVQQQADDGEACGSGSSERHLKRKDLDGVEVNQDT
PPQKWQSTSPLPHGSVSPVIINHKAGSASPEPSDKGFSMEVVESNKITLSGEMEPGYASN
SSTITNVSSKGSCDDAGFGSVAGSCEGNTRSVEGSSVGSNNPGYLLGDVCEADSEALSDS
GCVNGNLRLSLTSMA
NT seq 2028 nt   +upstreamnt  +downstreamnt
atggtgagttccgagggattgagtgctccgctgtcgcttcctcaagtggcagcgaggcag
tacggagtgacaaagccaatatcgactgccgggccgacggaagtcgatattctgaggaca
ttagagttggagaagtttttggttgatgctgggctttatgaaaccaaagaaggagttgcc
aagagagaggaggttcttcggcgtatcgagcagattgtcaaggattgggtgaagcaactt
actcgcttgagagggtacacagatcaaatggttgaggacgctaatgctcgtatttttaca
tttgggtcctataggctcggggtgcatggtcctggggctgacatagacacgttatgtgtt
gggccatcctatgtcaatcgagaggaagacttcttctttgtattgcacaacattcttgct
gagatggaagaggtgaccgagctgcaaccagttccagatgctcatgtccctgtaatgaaa
tttaagtttgacggaatatcgatcgacctcctttatgctagtatttctctcttggttgta
ccagaagacctggacatttctgatgtatctttgttgtacaatatcgatgagcctactgtt
cgaagtcttaatggctgcagggtcgcagatcaaattttaaagcttgttccaaatgttgag
cacttttgcacaacactcagatgcttgaaattttgggcgaaaagacgcggtgtttattcc
aatgttactggatttcttggcggagtaaactgggctcttcttgttgcccgggtttgccaa
ctttatcccaatgcagttcccagcatgcttgtttctcgattctttagggtctatacacag
tggcggtggccaaatcctgtcatgttgtgtcccattgaagaggatgaacttggcttttct
gtttgggaccctcgcagatatcctcgtgaccggactcatcatatgccaattataactcct
gcatacccttgtatgaattctagctataatgtttcacaaagtactctgcgtgttatggtc
gagcagttctgttacggaaacaagacctgtgaggaagtggaattgaatagagctcaatgg
tgtgcattgtttgagccgtacatgttctttgaaagctacaaaaactatctccaggttgac
ataattgctgctgatgttgacgacttgcgtgcttggaaaggctgggtggaatctcgactg
aggcaactaactctaatgattgaacgggatactttagggatgttacagtgccatccttgt
ccacatgagtatgttgatacgaataaagaatgcgcacattgtgcattttttatgggtttg
cagaggaaacagggtgaaaaggttcagggtcagcagtttgatatacgagggactgttgat
gggttcaggcattccattaatatgtacatgttttggaaaccagggatggaaattcatgta
tctcatgttcgtagaaggcaacttcctccttatgtgtatcctgatggttgtaaacgacct
cgacaatccagagttatggtccagcagcaggctgatgatggcgaagcttgtgggagtggt
tctagtgagagacacctgaagaggaaggatcttgatggggtggaggtgaatcaagatact
ccaccgcagaaatggcaatctactagccctctgccccatggttcggtttctcctgtaatt
atcaatcacaaggcaggcagtgcatctccagagccttcggataaaggttttagcatggaa
gtagtagagtcaaataaaataacactgtctggtgaaatggagcctggatatgcctccaat
tccagtactattacaaatgtttcaagcaagggcagttgtgatgatgctggatttggatca
gtggctggtagctgtgaggggaacactaggagcgttgagggaagcagtgttgggagtaac
aacccaggatatttgctgggtgatgtgtgtgaggcagactccgaagctctttcggatagt
ggatgcgtaaatggaaacctacggttgagcctaacatcaatggcctga

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (12)   

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