KEGG   Malus domestica (apple): 103443740
Entry
103443740         CDS       T03194                                 
Name
(RefSeq) nuclear poly(A) polymerase 4-like isoform X1
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
mdm  Malus domestica (apple)
Pathway
mdm03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    103443740
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mdm03019]
    103443740
Enzymes [BR:mdm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     103443740
Messenger RNA biogenesis [BR:mdm03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     103443740
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 MTPAP-like_central
Other DBs
NCBI-GeneID: 103443740
NCBI-ProteinID: XP_008380850
Position
09:join(18197544..18197678,18197767..18197844,18198740..18198847,18199054..18199116,18199217..18199378,18200035..18200148,18200266..18200328,18200424..18200753,18200898..18201062,18201151..18201963,18202353..18202426,18202518..18202542)
AA seq 709 aa
MVSSEGLSAPLSPLQAAVRQYGVTKPISTAGPTEVDIQRTLELEKFLVEAGLYESKEEVA
KREEVLQRIGQIVKDWVKQLTRLRGYTDQMVEDANALIFTFGSYRLGVHGPGADIDTLCV
GPSYINREEDFFFVLHNILAKMEEVTELQPVPDAHVPVMKFKFDGISIDLLYASISLLVV
PEDLDISDVSLLYDIDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYS
NVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFS
VWDPRRYPRDRTHHMPIITPAYPCMNSSYNVSQSTLRVMVEQFCYGNKICEEVELNKAQW
CALFEPYLFFESYKNYLQVDIVAADVDDLRAWKGWVESRLRQLTLMIERDTLGMLQCHPY
PHEYFDANKQCAHSAFFMGLQRKQGEKVQGQQFDIRGTVDEFRHSINMYVFWKPGMEIYV
SHVRRRQLPPYVYPDGCKRPQPSRVIAQQQANDGEVCGSGSSERHLKRKDLDGVEVNQDT
TPQKRQSTSPPPHDSVSPVIISHNASSACPEPLDKGFSMEVVESNKRTLSGEMEPEYASN
SSTITHVSSKGSCDDAGFGLVAGICEGNTRNVDGSSVGSNNPGYLQGDVCGADSKGLLDN
GCINGNLQQNGSREALEKVNAAFGMVLNSSEGVNSEQITGLRFSLTSTA
NT seq 2130 nt   +upstreamnt  +downstreamnt
atggtgagttcagagggattgagtgctccgctgtcgcctcttcaagcggcggtgaggcag
tacggagtgacaaagccaatatcgactgcggggcctaccgaagtcgatattcagaggaca
ttggagttggagaagtttttggttgaagctgggctttatgagagcaaagaggaagttgcc
aagagagaggaggttcttcagcgtatcgggcagattgtcaaggattgggtgaagcaactt
actcgcttgagaggatacacagatcaaatggttgaggatgctaatgctcttatttttaca
tttggctcctatagactaggggtgcatggtcctggtgctgacatagacacattatgtgtt
gggccatcctatatcaatcgagaggaagacttcttctttgtattgcacaacattctggct
aagatggaagaggtgaccgaactgcaaccagtgccagatgctcatgttcctgtaatgaaa
tttaagtttgacggaatatcgattgacctcctttatgctagtatttctctcttggttgta
ccagaagacctggacatttctgatgtatctctgttgtacgatatcgatgagcctactgtt
cgaagtcttaatggctgcagggtcgctgatcaaattctaaagcttgttccaaatgttgag
catttttgtacaacactcagatgcttgaagttttgggcaaaaagacgtggtgtttattcc
aatgttactggatttcttggcggagtgaactgggctcttcttgttgcccgggtttgccag
ctttatcccaatgcagttcccagtatgctggtttctcgattcttcagggtctatacgcag
tggcgttggccaaatcctgtcatgttgtgtcccattgaagaggatgaactcggcttttct
gtttgggaccctcgcagatatcctcgtgaccggactcatcatatgccaattattactcct
gcatacccttgtatgaattctagctataatgtttcacaaagtactctgcgtgttatggtc
gagcagttctgttacggaaacaaaatctgtgaggaagtggaattgaataaagctcaatgg
tgtgctttgtttgagccgtacttgttctttgaaagctacaaaaactatctccaggttgac
atagttgctgctgatgttgatgacttgcgtgcttggaaaggctgggtggaatctcggctg
aggcaactaactctaatgattgaacgagatactttagggatgttacagtgccatccttat
ccccatgagtattttgatgctaataaacaatgtgcacatagtgcattttttatgggtttg
cagaggaaacagggtgaaaaggttcagggtcagcagtttgatatacgagggactgttgat
gagttcaggcattccattaatatgtacgtgttttggaaaccagggatggaaatttatgtt
tctcatgttcgtagaaggcaacttcctccttatgtgtaccctgatggttgtaaacgaccg
caaccatctagagttatcgcccagcagcaggctaatgatggcgaagtttgtgggagtggt
tctagcgagagacacctgaagaggaaggatcttgatggggtggaggtgaatcaagatact
acaccacagaaacggcaatctactagccctccgccccatgattcagtttctcctgtaatt
atcagtcacaacgcaagcagtgcatgtccagagcctttggataaaggttttagcatggaa
gtagtagagtcaaataaaagaacgctgtctggtgaaatggagcctgaatatgcctccaat
tccagtactattacacatgtttcaagcaagggcagttgtgatgatgctggatttggatta
gtggctggtatctgtgaagggaacactaggaacgtcgacggaagcagtgttgggagtaac
aacccaggatatttgcagggtgatgtatgtggggcagactccaaaggtcttttggataat
ggatgcataaatggaaacctacagcaaaatggatcccgtgaagcattagagaaggtgaac
gctgcatttgggatggtactcaattccagcgagggagtaaactcagaacaaataacaggg
ttgaggtttagcctaacatcaacggcctga

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (12)   

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