KEGG   Methylocapsa sp. D3K7: QEV83_19155
Entry
QEV83_19155       CDS       T08996                                 
Symbol
uvrC
Name
(GenBank) excinuclease ABC subunit UvrC
  KO
K03703  excinuclease ABC subunit C
Organism
medk  Methylocapsa sp. D3K7
Pathway
medk03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:medk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    QEV83_19155 (uvrC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:medk03400]
    QEV83_19155 (uvrC)
DNA repair and recombination proteins [BR:medk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     QEV83_19155 (uvrC)
SSDB
Motif
Pfam: UvrC_RNaseH_dom UvrC_RNaseH HHH_5 UVR GIY-YIG HHH_2 IMS_HHH GIY_YIG_2
Other DBs
NCBI-ProteinID: WGJ14704
Position
complement(4088046..4090121)
AA seq 691 aa
MSRVQKNGSSPGGTASSVAGIADAQAETLATNQTDGCSGFDQASVNGDDDSQILHGPAVI
RQFWEHAPAGPGVYRMIGAGHEVLYVGKAKNVRKRIASYMRASGQTTRIARMIGLTVSMV
FVSTATETEALLLEINLIKQLKPRFNVLLRDDKSFPYILLTGDHAAPQITKHRGARNQKG
DYFGPFASVLAVNRTLNALQRAFLLRSCSDSFYANRTRPCLLYQIRRCSAPCTGEIALAE
YENLVREARDFLSGKSRTVRERLAAEMTEAANLMEFERAARLRDRIAALSAIQGAQGINP
KTVEEADVFAIAEQAGQFCVEVFFFRTFQNWGNRAYFPRADKSLSPGEVLDAFVAQFYAD
TPPPRLILLSHDIENRAILEEALRERARRAIEIAVPRKGEKKDLVEQAGQNARAALGRKL
SETASQAHLLAALGSAFGLSGAPRRIEVYDNSHIMGTNAVGAMIVAGADGFMKMHYRTFN
IKSLDLTPGDDYAMMREVLRRRFARLLKDEAAMPEVNEVLTGANGEAAREMTPTDEAPFP
DRPDLILIDGGKGQFEAARAILKELGVTGVAVASIAKGVDRNAGRESFFVEDKEPFKLSP
RDPALYFVQRLRDEAHRFAIGTHRARRKKEFTQSPLDEIPGIGPARKRALLHAFGTAKAI
SRAALPDFEKVPGINAATARRVYDFFHERGR
NT seq 2076 nt   +upstreamnt  +downstreamnt
atgtcgcgtgtgcaaaaaaacggatcaagcccaggcggaacagcgagcagcgttgccggc
atcgcggacgcacaagccgaaaccttagccacaaaccagacagatgggtgttccggtttc
gatcaagcctccgtgaacggcgatgacgacagccagattctgcatggcccggcagtcatc
cggcaattttgggaacatgcgccggccggccctggcgtctaccggatgatcggcgccgga
cacgaagttctctatgtcggcaaagcaaaaaatgtccgcaagcggatcgccagctacatg
cgggcgtccggccaaaccacccgcatcgcccggatgatcggccttaccgtctcgatggtg
ttcgtctcgaccgcaaccgagacagaggcgctgctgcttgagatcaacctcatcaagcaa
ctgaagccgcgtttcaatgtgttgttgcgcgacgacaagtcctttccctatattctgctc
accggcgatcacgccgcgccgcaaattaccaagcatcggggcgcgcgcaatcaaaaaggc
gactattttggccccttcgccagcgtcttggcggtcaatcgcacgttgaacgccttgcaa
cgcgccttcctgttgcggtcctgctcggatagtttttacgccaatcgcacccgtccctgt
ttgctctatcaaatcaggcgctgctcggcgccttgcaccggagaaatcgcgctggcggaa
tatgagaacctcgtgcgcgaggcgcgcgattttctgtcgggcaaaagccggactgtccgc
gagcgtcttgcggcggaaatgacggaggccgcgaacctcatggaattcgagcgcgccgcc
cggttgcgggaccggatcgcggcgctctccgccattcagggcgcccaggggatcaatcca
aagaccgtcgaagaggcggatgtgttcgccatcgccgagcaagccgggcagttttgtgtg
gaggtttttttcttccggacgtttcagaactggggcaatcgcgcctattttccacgcgcc
gacaaaagtctctcgccgggcgaggtcctggatgcctttgtcgcgcaattttatgcagat
actccaccgccgcgtcttattctgctatcccatgacatcgaaaatcgcgcgatcctcgaa
gaggccctgcgcgagcgcgcccgccgcgccattgaaattgccgttcctcgaaaaggagaa
aaaaaggatctcgtggaacaggccgggcaaaatgcccgcgccgcgttgggacgcaaattg
tcggaaaccgcgtcccaggcacatctcctcgccgcgcttggcagcgctttcggattaagc
ggggcgccgcggcgaatcgaagtctatgacaattcgcatatcatgggcacgaacgcagtc
ggcgcgatgattgtcgcgggcgcggacggcttcatgaaaatgcattatcgcacgtttaat
atcaaaagcctcgatctcaccccgggcgacgattacgccatgatgcgtgaggttttgcgg
cggcgctttgcccggctcctgaaggacgaagccgcgatgccagaggtgaacgaggtgcta
accggcgcaaatggcgaggctgcacgtgaaatgacgcccaccgatgaggcgccgtttccg
gatcgtccggacctgattctgatcgacggcggcaaaggccaattcgaggcggcacgggcg
attttgaaggagcttggcgttacaggcgtggccgtcgcctccatcgccaagggggttgac
cgcaacgcgggacgcgagagtttctttgtcgaggacaaggagccgttcaagctgtcgccg
cgcgatcccgccctttatttcgtgcagcggctgcgcgacgaagcgcatcggttcgcgatc
ggaacccaccgggcgcgccgcaaaaaggagttcacccaaagcccgcttgacgaaatccca
ggcatcggcccagcgcgcaaacgtgccttgctccatgctttcggcaccgccaaggcgatt
tcccgggccgctttgccggactttgagaaagttccgggaataaatgccgcgacggcgcgg
cgggtctatgatttttttcacgaacgtggcagataa

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