KEGG   Methylomonas sp. EFPC3: PL263_09295
Entry
PL263_09295       CDS       T10335                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
meec  Methylomonas sp. EFPC3
Brite
KEGG Orthology (KO) [BR:meec00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:meec03032]
    PL263_09295
   03036 Chromosome and associated proteins [BR:meec03036]
    PL263_09295
   03400 DNA repair and recombination proteins [BR:meec03400]
    PL263_09295
DNA replication proteins [BR:meec03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    PL263_09295
Chromosome and associated proteins [BR:meec03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    PL263_09295
DNA repair and recombination proteins [BR:meec03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      PL263_09295
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_1 HU-CCDC81_euk_2 Lmo2446-like_N HU-DNA_bdg
Other DBs
NCBI-ProteinID: WFP52204
Position
complement(2104394..2104666)
AA seq 90 aa
MNKSELIDAIASASQLTKADAGRALDGFIKAVEDALKQGDSVALVGFGTFDVKERAERKG
RNPQTGEEITIKAAKIPSFKAGKSLKDAVN
NT seq 273 nt   +upstreamnt  +downstreamnt
atgaataaatcggaacttattgacgctattgccagtgcgtcacagttgacaaaagccgat
gctggtcgggctctggatggttttatcaaagccgttgaagacgcattgaaacaaggcgat
tccgttgccctggttggtttcggtactttcgatgttaaagaaagagcggaacgtaaaggc
cgcaacccgcaaaccggcgaagagatcaccattaaagccgcaaaaattccttcatttaaa
gctggcaaatctttaaaagatgctgtaaactag

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