KEGG   Massilia endophytica: LSQ66_22230
Entry
LSQ66_22230       CDS       T09693                                 
Name
(GenBank) uracil-DNA glycosylase
  KO
K03648  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
meny  Massilia endophytica
Pathway
meny03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:meny00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    LSQ66_22230
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:meny03400]
    LSQ66_22230
Enzymes [BR:meny01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     LSQ66_22230
DNA repair and recombination proteins [BR:meny03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     LSQ66_22230
 Prokaryotic type
     LSQ66_22230
SSDB
Motif
Pfam: UDG NRN1
Other DBs
NCBI-ProteinID: UGQ46450
Position
4839790..4840461
AA seq 223 aa
MGEDSVRIEPTWKARLAPEFVKAYWQELSGFVKGEYAATHCCPPGKHIFRAFDLTPFDKV
KVVILGQDPYHTPGAAMGFCFSVPEGNRPQPSLQNIFKEIESDTGVRRTRTDLSDWAEQG
VFLLNSVLTVRAGEAGSHAKRGWENFTDCAIRALSEEREHIVFILWGSYAISKKALIDTS
KHLVITSPHPSPLSVHRGFYGSKPFTRANAYLAAHGQEPIRWA
NT seq 672 nt   +upstreamnt  +downstreamnt
atgggcgaggacagcgtccggatcgagcccacctggaaggcgcggctcgcaccggagttc
gtgaaggcgtactggcaggagctgtccggcttcgtcaagggcgaatacgcggcaacgcac
tgctgcccgccgggcaagcacattttccgcgccttcgacctcacgcctttcgacaaggtg
aaggtcgtcattctcggccaggacccctaccacacgcccggcgcggccatgggtttctgc
ttctcggtccccgagggcaaccgcccgcagcccagccttcagaacatcttcaaggagatc
gagagcgacacgggcgtgcgccgcacgcgcaccgatctctccgactgggccgaacagggc
gtcttcctgctgaacagcgtgctcaccgtgcgcgcgggcgaagcgggctcgcatgcaaag
cggggctgggagaacttcaccgactgcgccatccgcgccctctcggaagagcgcgagcac
atcgtgttcatcctgtggggcagctacgccatttccaagaaggccctgatcgacacgagc
aagcacctcgtcatcacttcgccgcacccttcccccctgtcggtgcaccgcggcttctac
ggcagcaagcccttcacgcgcgccaacgcctacctcgctgcgcatgggcaggaaccgatt
cgctgggcctaa

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