KEGG   Manihot esculenta (cassava): 110624527
Entry
110624527         CDS       T05761                                 
Name
(RefSeq) nuclear poly(A) polymerase 1
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
mesc  Manihot esculenta (cassava)
Pathway
mesc03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    110624527
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mesc03019]
    110624527
Enzymes [BR:mesc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     110624527
Messenger RNA biogenesis [BR:mesc03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     110624527
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 MTPAP-like_central
Other DBs
NCBI-GeneID: 110624527
NCBI-ProteinID: XP_021625419
Position
1:complement(4075005..4087698)
AA seq 759 aa
MGSPGLSTGNNGGQQQRLGITEPISLGGPTEYDEIKTRELEKFLQDVGLYESREEAVSRE
EVLGRLDQIVKNWVKAISRSKCLNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPR
HATREDDFFGELYRMLLEMPEVTELHPVPDAHVPVMKFKFKGVSIDLLYAKLSLWVIPED
LDISQDSILQNADEQTVRSLNGCRVTDQILRLVPNIKNFRTTLRCMRFWAKRRGVYSNVA
GFLGGINWALLVARICQLFPNALPNMLVSRFFRVYTQWRWPNPVMLCAIEEKSLGLQVWD
PRRNPKDRFHLMPIITPAYPCMNSSYNVSSSTLRIMTEEFQRGNEICEAMEANKADWDTL
FEPFSFFEAYKNYLQIDINAENEDDLRNWKGWVESRLRQLTLKIERHTFNMLQCHPHPGE
FTDKSRPLHCSFFMGLQRKQGVPASEGEQFDIRLTVEEFKHSVNMYTLWKPGMEIHVTHV
KRRNIPSFVFPGGIRPPRPSKATWDSRRSSAEKSSECKGVSDGLDDGRKRKRMDANGANT
LKGANSFAASSLNGEDNKGSPSVGNVSVGGVLASTNVIGEPREGKTVCNITDSINNSRSL
GGNLAQNGELSSQNKDLSASNDAPFSKEAEKLAIEKIMSGPYVTNHTLPQELDDLEDDFE
CRNQVKDLGANAKDSTVESTLATMTATSFANAPESPPLTSSSGAGPSTLCPSGGLEELEP
AELVAPLSNGFRSAASVAQPKPLIRLNFTSLGKASGRST
NT seq 2280 nt   +upstreamnt  +downstreamnt
atggggagtccaggattaagcactggaaataatggtggacagcaacagcgattaggcatt
acagaacccatttccttgggtggtccaacagagtacgatgagataaagacccgagaactt
gaaaagtttttgcaggatgtgggactgtatgagagtagggaggaagctgtgagtagagag
gaagtgcttgggaggctggaccagattgtgaagaattgggtcaaagcgattagccgctca
aaatgtttgaatgagcaactagtacaagaagcaaatgctaagattttcacctttggttct
tatcggctaggggtgcatggccctggagcagatatagacacgctctgtgtgggacctaga
catgcaacacgagaagatgattttttcggcgagctatatagaatgcttttggagatgcct
gaagtgacagagttgcatcccgttcctgatgctcatgttccagtaatgaaattcaagttt
aaaggtgtttctatagatcttctttatgcaaagttgtccctttgggtaattcctgaagat
ctagatatttcacaggactcaatactgcaaaatgctgatgaacaaaccgtccgcagtctt
aatggttgcagagttactgatcagattttacgtttggtgccaaatattaagaatttccga
acaacattgcgatgcatgaggttttgggcaaaacgacgtggtgtttattcaaatgttgca
ggatttcttggtggcataaattgggcattactagttgctcgtatatgccagctattcccc
aatgcgttgccaaatatgttagtatctcggttcttcagggtatatactcagtggcgttgg
ccaaatcctgtcatgctctgtgccattgaagaaaaatctcttggtcttcaggtctgggac
cctagaagaaatccaaaagataggttccatttgatgcccattattactcctgcgtatcct
tgcatgaattctagctacaatgtttcatcaagcactttgcgcataatgacagaagagttt
caaagggggaatgagatttgtgaggctatggaggcaaacaaggctgattgggatacactt
tttgagcctttttctttctttgaagcatacaagaattatctacaaatagatattaatgca
gaaaatgaagatgatttaagaaactggaaagggtgggttgaatcccgtctccgtcagctt
acgttgaagatcgagaggcacactttcaatatgcttcagtgccatcctcatccaggtgaa
tttacagacaaatctagacctctacattgttctttctttatgggattgcaacgtaaacaa
ggggtccctgcaagtgaaggtgaacagtttgatataaggttaactgttgaggaatttaaa
cactctgttaatatgtataccttgtggaagcctggaatggagattcatgtaacccatgta
aaacggaggaacatacctagctttgtttttcctggtggtattcgtcctcctcgtccatca
aaagcaacttgggatagcaggcgaagttcagctgaaaaatcatctgaatgtaaaggagtt
tcagatgggttggatgatggaaggaagagaaagcgaatggatgctaatggagcaaatacc
ctgaaaggtgccaattcctttgctgcttcttctttgaatggggaagataataagggaagt
ccttctgttggcaatgtttctgtaggaggtgtccttgctagtacaaatgtgataggggag
ccaagggaaggaaaaacagtgtgcaatataacagacagcataaacaattcaagaagctta
ggtgggaatcttgctcaaaatggggagcttagttcacaaaataaagatttgtctgcctcc
aatgatgcccctttctctaaggaggctgagaagctggcaattgaaaaaataatgtctggt
ccttatgttactaaccatactttaccacaagagcttgatgatcttgaagatgattttgaa
tgtagaaatcaggtcaaagatttgggggcaaatgcaaaagacagtacagtggaatctaca
ttggcaactatgacagcaacatcatttgctaatgcacctgaatcaccaccactaacatcc
agcagtggagctggtccatctactttatgtcctagtggaggcttggaggagcttgagcct
gctgaacttgtggcaccattgtccaatgggttccgttctgctgcttcagtggcacagccg
aagccgcttatcaggttgaacttcacttctttaggtaaagccagtggcagaagcacataa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (10)   

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