KEGG T10264: 136471396

Miscanthus floridulus: 136471396

Entry

136471396         CDS       T10264

Name

(RefSeq) uncharacterized protein

K13100

pre-mRNA-splicing factor CWC22

Organism

mflo Miscanthus floridulus

Brite

KEGG Orthology (KO) [BR:mflo00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mflo03041]
    136471396
Spliceosome [BR:mflo03041]
Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    136471396
Complex C
   U4/U6.U5 tri-SnRNP related factors
    136471396

SSDB

Motif

Pfam:

MA3 HEAT_5MP1_2

Other DBs

NCBI-GeneID:

136471396

NCBI-ProteinID:

XP_066325218

Position

8:complement(26687913..26695634)

AA seq 795 aa
MAASASASPPRRRHSHRDDVSPRRRKRRASPSPCPPRSPSPGVDADRRRRSRASPPDSDR
RGRRRDAEPSEEKENGHAKPGRDEDGDNRPPRRDRVSDGEDGVERRRMRDKVSDDEKEEG
RRRRRARDADDEPDDRRGKRDRERERDSRRHRRRSPSSESGSSPDDRRHRRRRRDEGSRR
RDDRRRREDDGDERRRSPVKREPTPPLPPPPPLLPEMIPGRTGGIYIPPFRMAQMMRDVE
DKSSPEYQRLTWDALKKSINGLVNKVNATNIKNIVPELFAENLVRGRGLFCQSCIKSQMA
SPGFTDVLAALVAVVNTKFPEIGWLLLVRVVLQLKRAYKRNDKPQLLAATKFIAHLVNQV
VAHELVALELLTVLLENPTDDSVEVAVGFVKECGAMLQDLSPQGLHAIFERFRGILHEGE
IDKRVQFLIEGLFAIRKAKFQGFPAIRPELDLVEQEDQFTHEISLEDDLDPETNLNVFWA
NPNFVEDEKAYENLKRSILGAESSEDEEGSDAASDDDEDEEESDEEDEEQMEIRDRTETN
LVNLRRTIYLTIMSSVDFEEAGHKLMKIKLEPGQEMELCIMLLECCSQERTYLRYYGLLA
QRFCMINKVYQENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLAYIRLT
EEDTTSSSRIFIKILFQELSEHLGIRLLNERLNDPNMQGSFESIFPKDHPKNTRFSINFF
TSIGLGGITESLREYLKNMPRLIMQQQKPESSESESSGSESGSESSSAGSSSESESESSS
DESDRRRSKKRRKRT

NT seq 2388 nt +upstreamnt +downstreamnt
atggccgcctccgcctccgcctccccgccgcgccgccgccacagccaccgcgatgacgtc
tccccgcgccgccgcaagcgccgcgcatccccgtccccgtgcccaccccgctcgccatcc
cccggcgtcgacgcggaccgccgtcgcagatctagggcttcaccgcccgattccgaccgc
cgcggccgccgccgcgacgccgagccctcagaggagaaggagaacggccacgccaagccc
ggaagggatgaggacggcgacaaccgccctccccggcgcgacagggtttcagatggggag
gatggtgtcgaacgccggaggatgcgcgataaggtttccgacgatgagaaggaggaaggc
cgtcggcgcaggcgggctagggatgcggatgacgagccggacgaccgccgtggcaagcga
gaccgggagagggagagggacagccggcgccaccgccgccggagccctagctcggagtca
gggtcctcacccgacgaccgtcgccaccgccgccggcgccgagacgagggctccaggcgg
cgggatgaccgtaggcgaagggaggacgacggagacgagcgccggagaagccctgtgaag
agggagccgaccccgccactgcctccaccaccaccgctgcttccggagatgatccctggc
cgcacgggtgggatctacatcccgcctttccgcatggcgcagatgatgcgtgatgtggag
gacaagtcgagccctgagtatcagcgcctcacctgggatgctctcaagaagagcatcaat
gggctggtgaataaggtgaatgcgaccaatatcaagaatatagtgccggagctcttcgca
gagaaccttgttcgtgggcgggggctcttctgtcagtcttgcatcaagtcacagatggcc
tcacctgggttcactgatgtattagctgcgctagttgcggttgtgaataccaagttccct
gagattgggtggttgcttcttgttcgtgttgtgctccagctgaagagggcatataagcga
aatgacaagcctcaattgcttgcggcaaccaaattcattgcgcacttggtaaatcaggtg
gtggcgcatgagcttgtggcgctggagcttcttactgtactcctggaaaatccaactgat
gatagtgttgaggttgctgtggggtttgtcaaagagtgtggggcaatgctgcaggacttg
tctcctcaagggcttcatgctatttttgaaagatttcgaggcattcttcatgaaggagaa
atagacaagagagtgcagtttcttattgaaggcctttttgcaatcagaaaggctaaattc
cagggtttcccagccatccgtccagagctggatctagtggagcaggaggaccagtttaca
catgagatatcccttgaagatgacctagaccctgagaccaatctaaatgttttctgggca
aaccccaattttgttgaagatgagaaggcatatgagaatctaaagagaagcatcctggga
gcagagtcttctgaagatgaagaaggatcagatgctgcttctgatgatgatgaagatgag
gaagaatccgatgaagaggatgaggaacaaatggagataagggatagaacagagacgaat
cttgtgaatcttagaagaacaatatatttgactattatgtccagtgttgattttgaagaa
gctgggcacaagcttatgaaaattaagcttgagcctggtcaagagatggagctgtgcatt
atgcttcttgagtgttgcagtcaggagagaacataccttcgttattatgggctgctagca
cagcgattttgcatgatcaataaagtgtaccaagaaaactttgaaaaatgctttgtgcaa
caatattcgatgattcatcgtcttgaaacaaacaagttgaggaatgttgccaagttcttt
gcacatttgttggggactgatgcgctcccttggcatgttttggcttacatcaggttgaca
gaggaagacacgacatcatcttctcgaatttttataaaaattctattccaagaattatcg
gagcacctgggcatacgcctactcaatgagaggctgaatgatcctaacatgcaaggttcc
ttcgagtctatctttcccaaggatcatccgaagaatacaaggttctcgatcaatttcttc
acgtccattggtcttggtggtataacggaaagcctgagggagtacttgaagaacatgccg
cgcctaataatgcagcagcagaagccggaatcatcggagtcagaatcaagtggatctgaa
tctggttcggaaagctctagcgcagggtctagttctgagtctgagtcagaatcaagctct
gatgagagtgacaggaggcggagtaagaagaggaggaagaggacttga

All links

Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (6)   

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