KEGG   Miscanthus floridulus: 136476052
Entry
136476052         CDS       T10264                                 
Name
(RefSeq) nuclear poly(A) polymerase 4-like isoform X1
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
mflo  Miscanthus floridulus
Pathway
mflo03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:mflo00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    136476052
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mflo03019]
    136476052
Enzymes [BR:mflo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     136476052
Messenger RNA biogenesis [BR:mflo03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     136476052
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 MTPAP-like_central Nrap_D2
Other DBs
NCBI-GeneID: 136476052
NCBI-ProteinID: XP_066329827
Position
8:27729909..27736542
AA seq 704 aa
MAGSVGKGRAALRASPKRYSGTDPPLSLAGPTLADLQRTAELEKFLVEAGLYEGKEESAK
REDVLSDIGQIVKEWVKQLTSKKGYADQLVEQANAVLFTFGSYRLGVHGPEADIDTLCVG
PSYVNREEDFFVTLHGILAEKEEVTELQPVPDAHVPVLKFKFRGISIDLLYASLSPSVIP
VDFDLSQGSVLCDVDEATVRSLNGCRVADQILRLVPNVENFRTTLRCLKYWAKRRGVYSN
ITGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIENNDLGFSI
WDPRKNPRDRNHLMPIITPAYPCMNSSYNVSSSTLRVIMEQFQFGNKICQEIELNKANWN
ALFEPFHFFEAYRKFLVVDIVAENDDDLRLWKGWIESRLRQLTLKIDRDTKGILQCHPYP
CEYSDPTIECAHCAFYMGLSRKQGSKKHGQQFDIRGTVDEFMREIGMYSLWKPGMDLAVT
HVHREQVPSYVFEQGYKKPCPTMHANQQEQSDGDVTLSPYLDSQLKRKYDSDGDGHVELC
KSVKRASASPPGVGTPPHGNSVSNVVCDSPVKFVSSVVCSGSLTSPSHDDINLEQAQLTT
SPYGSEDTSASGTSFAAVGAVVLADESSKLGNLTSDLEVNTIQTMPLHTYLECVAQKDET
KLEEIRSLASSNCAEFVELSSCREGDAGVKLHSNQRCQKSELRT
NT seq 2115 nt   +upstreamnt  +downstreamnt
atggcgggatctgtcggcaagggcagggcggcgctgcgggcgtccccgaagcggtacagc
ggcacggacccgccgttgtctctggcggggccgacgttggcggatctgcagaggacggcc
gagctggagaagttcttggttgaagcgggcctctatgaggggaaagaggagtctgcgaag
cgggaagatgtgctatccgatattggtcagatagtcaaggaatgggtgaagcagttgact
agtaagaaaggatatgctgatcaattggttgaacaagcaaatgcagtcctttttactttt
gggtcttacagattgggggttcatggacctgaagctgatattgataccctttgtgttgga
ccttcatatgtgaaccgagaggaggatttctttgtcacactgcatggcatattagcagag
aaggaagaagttactgagttgcaacctgtacctgatgctcacgtacctgtattgaaattt
aagttccgtgggatatcaattgaccttctgtatgctagcctctctccttcagtgatacca
gtggattttgatctctctcaaggatctgtgctttgtgatgttgatgaagcaactgttcga
agtcttaatggatgcagagtggcggatcagattcttcggcttgttccaaatgttgagaat
ttccgaacaacactcagatgcttgaagtactgggcaaagagaaggggtgtttattctaat
attactggtttccttgggggtgtcaactgggctctgctggttgcccgtgtctgccaactc
tatcctaatgctgtgccaagtatgctggtttctaggttcttcagagtttttacccagtgg
caatggccaaatccagtgatgctatgtgcaattgagaataatgatcttggtttttctata
tgggatccacgcaaaaatccgcgtgatagaaaccatctcatgcccatcatcactccagcc
tacccatgcatgaactctagttacaatgtttcaagcagcacactgagggttataatggag
caatttcaatttggcaacaaaatttgtcaggaaattgaacttaataaggccaattggaat
gctttatttgagcctttccatttttttgaggcatacagaaagtttctagtggttgacata
gttgcagagaatgatgatgatcttcgtctttggaagggatggatcgagtctcgtttgaga
caacttactttaaagattgatcgggatactaaaggaattttgcagtgccatccataccca
tgtgagtattcagatcccacaatagagtgtgcacattgtgccttctacatgggcttatca
aggaaacaggggtcgaaaaaacatggtcaacagtttgatatccgtgggacagtagatgaa
tttatgcgtgaaattggcatgtattcattgtggaagcctgggatggatctggctgtcacc
catgtccatagggagcaggtcccatcttatgtatttgagcaaggatacaagaaaccctgc
cctacaatgcatgcaaaccaacaagagcagtctgatggagatgtcacattgagcccatat
ctggacagtcagcttaagagaaagtacgattccgatggagatggccatgtggaactttgc
aaatctgtaaaaagggcttcagcaagcccacctggtgtgggaaccccacctcatggaaat
agtgtcagtaacgtcgtttgtgacagcccagtcaaattcgtttcaagtgtcgtttgcagc
ggatctctgacttctccatcgcatgatgatataaacttagaacaagcacaattaactact
tcaccatatggatctgaggatacctcagcatcaggcacaagctttgcagcagtgggagca
gttgttttggctgatgaatccagcaagctcggtaacttgacatcagatcttgaagttaat
acaattcagacaatgccactgcacacatatttagaatgcgtcgctcagaaggatgaaaca
aagctcgaggaaatcagaagcttggcaagcagcaattgtgcagagtttgtagagctcagt
tcttgccgagaaggtgatgcaggtgtgaagttgcatagcaatcagagatgccagaaatcg
gagttgaggacttaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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