KEGG   Alexandromys fortis (reed vole): 126489783
Entry
126489783         CDS       T08493                                 
Name
(RefSeq) nuclear pore complex protein Nup160 isoform X1
  KO
K14303  nuclear pore complex protein Nup160
Organism
mfot  Alexandromys fortis (reed vole)
Pathway
mfot03013  Nucleocytoplasmic transport
mfot05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:mfot00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    126489783
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    126489783
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mfot03019]
    126489783
   03036 Chromosome and associated proteins [BR:mfot03036]
    126489783
Messenger RNA biogenesis [BR:mfot03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     126489783
Chromosome and associated proteins [BR:mfot03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    126489783
SSDB
Motif
Pfam: TPR_Nup160_C Beta-prop_Nup120_160 TPR_NUP160_120_M NUP160_helical HEAT_Nup120 TPR_NUP120_160 TPR_2 DUF3942
Other DBs
NCBI-GeneID: 126489783
NCBI-ProteinID: XP_049980251
Position
Unknown
AA seq 1402 aa
MAAAGSLERSFVELIGAERERPRHFREFTARVVGTASAVFGAVKYSESAGGFYYVESGKL
FSVTRNRFIHWKTTGDTLELVEESLDINLLNNAVRLKFQNCSLLPSGVHVSETQNHVIIL
ILTNQTVHRLILPHPSRMYRSELVTESQMQSIFTDIGKVDFRDPCNYQLIPTVPGLSPNS
TTSAAWLSSDGEALFALPSAAGGIFVLKLPPYDIPGVASVVELKQSSVMQRLLTGWMPTA
IRGDQGPSDRALSLAVHCVEHDAFIFALCQDHKLRMWSYKDQMCLMVADMLEYVPVNKDL
RLTAGTGHKLRLAYSPSMGLYLGIYMHAPKRGQFCVFQLVSTENNRYSLDHISSLFTSQE
TLVDFALTSTDIWALWHDAENQTAVKYVNFEHNVAGQWNPVFMQPLPEEEIVIRDDQDPR
EMYLRSLFTPGRFINAALSKALQIFCRGTERNLDLSWSELKKEITLAVENELQGSVTEYE
FSQDEFRTLQQEFWCKFYACCLQYQEALSHPLALHLNPLTNMVCLLKKGYLSFLAPSSLV
DHLYLLPDEHLLTEDETTISDDADVARDVICLIKCLRMIGESVTMDMAVLMETSCYNLQS
PEKAAEHILEDLITIDVENVMEDICSKLQEIRNPVHAIGLLIREMDYETEVEMEKGFDPA
QPLNVRMNLYQLCGSSTAGYIVCRGVYKIANTRFLICRDLLILQQLLTRLGDAVILGAGQ
LFQAQQDLLHRTAPLLLSYYLIKWASQCLATDVPVDTLESNLQHLSVLKLTDSGALMANK
LGSSPQTIMELFFHEVARKHIISHLFSQPKAPLSQTGLNWPEMITAITSYLLQLLWPSNP
GCLFLECLMGNCQYVQLQDYIQLLNPWCQVNVGSCRFMLGRCYLVTGEVQKALECFCQAA
SEVGKEEFLDRLIRSEDGEIVSTPKLQYYTKVLSLLGVVGLPELIIQLATVAITETGDDW
KSQAILRTCIFKHHLDLGHNSQAYEALTQIPDSSSQLDCLRQLVVVLCERSQLQDLVAFP
YVNLHNEVVGIIESRARAVDLMTHNYYELLYAFHIYRHNYRKAGTVMFEYGMRLGREVRT
LRGLEKQGNCYLAAINCLRLIRPEYAWIVQPASGAVSDRPGASPKRNHDGECTAAPSNRQ
IEILELEDLEKECSLARIRLMLARHDPSAIAIAGSSSAKEMVTLLVQAGLFDTAISLCQT
FKLPLTPVFEGLAFKCIKLQFGGEAAQAEAWAWLAANQLSSVITTKESSATDEAWRLLST
YLERYRVQNNLYHHCVINKLLSHGVPLPNWLINSYKKVDAAELLRLYLNYDLLEEAVDLV
SEYVDAVLGKGHQYFGIEFPLSATAPMVWLPYSSIDQLLQALGENSANSHNIVLSQKILD
KLEDYQQKVDKATRDLLYRRDL
NT seq 4209 nt   +upstreamnt  +downstreamnt
atggcggcggcgggatccctggaacggagcttcgtggagctgatcggagctgaacgcgaa
aggcccaggcactttcgggaatttacagcccgcgtcgttgggactgccagtgctgtgttt
ggagccgtgaaatacagcgagagcgcgggaggcttctattatgtggaaagtggcaagttg
ttctccgtcaccagaaacaggttcattcattggaagactactggggatacattggagctg
gtggaggaatcactggacataaatttgttgaataatgcagttcgcctaaaattccaaaat
tgcagcctcttacccagtggggttcatgtctctgaaactcagaatcatgtgataatcttg
atattaaccaatcagacagtgcacaggttaattttaccacatccttcccgtatgtacaga
agtgagctggtaactgaaagtcagatgcagtcaatatttactgacattggaaaagttgat
ttcagagatccttgcaactatcaattaattccaacagtacctggactgtccccaaattct
accacctctgcagcctggcttagcagtgatggggaggctctttttgctttaccatctgct
gctggcggcatctttgttcttaagctacctccttatgacatacccggggtagcatcagtt
gtggaactgaaacagagttcagtgatgcagcgattgctcacaggctggatgcccacagct
ataaggggtgaccaggggccttcagatcgtgccctcagtcttgctgttcactgtgttgaa
cacgatgctttcatttttgccctgtgtcaggatcataaactccggatgtggtcctataag
gaccaaatgtgcctgatggtggctgacatgctggaatatgtccctgtgaacaaagacctt
cgactcactgcaggaacgggacataaattacgacttgcttattcaccttccatggggctc
tacctaggaatatatatgcatgcccccaaacgaggacagttctgcgttttccagttggtg
agcactgagaataatcggtatagtttagatcacatttcttccctgttcacttctcaggaa
acactggttgattttgccttgacctcaactgacatctgggccctgtggcacgacgctgag
aaccagacagctgtcaaatatgtcaactttgaacacaatgttgccggtcagtggaatcca
gtttttatgcagcctctgccagaagaagaaattgtcatcagagatgaccaagaccccaga
gaaatgtatttgcggagcctttttacaccaggacgattcataaatgcagctttatctaaa
gctttacagattttctgcaggggaactgagagaaacttggatctttcatggagtgaactt
aaaaaagaaattactttagctgttgaaaatgagctccaaggaagtgtaacagaatatgaa
ttctcccaggatgaatttcgtactttgcaacaggaattctggtgcaagttctatgcctgc
tgtctccagtatcaggaagccctctctcaccctcttgctctacatttgaatcctctcaca
aacatggtgtgccttctgaagaaaggatacctgtctttcctggcgccatcttccttagta
gatcatttgtatctcctgcctgatgagcaccttttgacagaggatgagacaaccatatcg
gatgatgcagatgtggctcgggacgtcatatgtcttataaaatgcctccggatgattgga
gagtcagttaccatggatatggcagttttgatggaaaccagttgttataacttacagtct
ccagaaaaggctgcagagcacattttggaagatttgatcactattgatgtagaaaatgtg
atggaagacatttgtagtaagctgcaagagatcagaaaccctgtccacgccattggactt
cttatacgggaaatggattatgagacagaagtagagatggaaaagggatttgatccagct
cagcctttgaatgttcgaatgaatctctaccagctctgtggtagtagcacagcaggctat
attgtgtgccgaggtgtgtataaaattgccaacactcgtttcctgatctgccgagaccta
ttgatcttacagcagcttttaacaagactaggagatgcagtgatcttgggagctggtcag
ctctttcaggcccagcaagacttgctgcaccgcacagctcccctgctcttatcctactac
ctcattaagtgggcaagtcagtgcttggcaactgatgttccagttgacacactggaatct
aatctgcaacatttgtcagtactgaaattaactgattctggtgccttaatggcaaataaa
ttgggttccagtcctcagacaattatggagttattcttccacgaagttgcaagaaaacat
attatatctcatctcttctctcaaccaaaagcccctttgagtcaaactggattgaactgg
cctgaaatgattactgcaattaccagttatttgttgcagcttttatggcctagcaatcct
ggttgtctctttctagaatgtttgatgggaaattgccagtatgtacaattgcaggattat
attcagctgttgaatccctggtgtcaagtcaatgttggatcctgtcgatttatgctggga
cggtgttacctggttacaggagaagtgcagaaggctctggaatgtttctgtcaggcagcc
tctgaagtaggcaaagaagaattcttagatcgcttgatccgctcagaggatggggagatt
gtgtcaactcccaagctgcagtattatactaaggttttaagtctcctgggtgttgttgga
ttgcctgaactgattatccagctggctactgtagcaattactgaaaccggtgatgactgg
aaaagtcaggctattttaagaacatgcattttcaaacatcatttggacttgggtcacaat
agccaagcatatgaggccttaacccaaattcctgattccagcagtcagctggactgcttg
cgacaactggtggtggttctttgtgagcgctcccaactgcaggacctcgtggcattccct
tatgtgaatctgcataatgaggttgtaggaataattgagtcacgtgctagagctgtggac
cttatgactcacaattactatgaacttctctatgcttttcacatataccgccacaattac
cgaaaagctggtacagtgatgtttgaatatggtatgcgccttggtagagaagttcgaact
ctccggggactcgagaagcaaggcaactgttatctggctgctattaactgtttacgcctt
attcgtccagagtatgcatggatcgtacagccagcttctggggcagtgtctgatcgccct
ggcgcgtctcccaagaggaatcatgacggcgagtgcaccgctgccccaagcaatcgacaa
attgaaattctggaactagaagatctggaaaaagaatgttctttagctcgaattcgcctc
atgttggctcgacatgatccatcagcgattgccattgcaggaagttcatcagcgaaggag
atggtcactcttctggttcaggctggcctctttgacactgccatatcactgtgtcagact
tttaagcttcccttaacaccagtctttgagggacttgcttttaagtgcatcaagttgcag
tttggaggagaagcagcacaagcagaagcctgggcctggttagcagccaatcagctgtct
tctgtcatcaccacgaaggagtccagtgctacagatgaagcatggaggttattgtcaact
tacttggaaagatacagagtccagaataacttgtatcatcattgtgtgatcaacaagttg
ttgtctcatggagtccctctgcctaactggcttataaacagttacaagaaagttgatgct
gctgagttgcttcgtctgtacttgaactatgaccttctagaagaagctgtcgatttggtc
tccgagtatgtagatgctgtattagggaaaggacatcagtactttggaattgagttccca
ctgtctgcaacagccccaatggtatggctcccatactcctctattgatcagcttctccag
gctcttggagaaaacagtgccaacagtcacaacattgtcctgtcccagaaaattcttgac
aaactagaagactaccagcaaaaagttgacaaggcaacacgggatttattataccgtcgg
gacttgtga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (8)   
   Pfam (8)   
All databases (14)   

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