KEGG   Alexandromys fortis (reed vole): 126498120
Entry
126498120         CDS       T08493                                 
Name
(RefSeq) DNA damage-binding protein 1 isoform X1
  KO
K10610  DNA damage-binding protein 1
Organism
mfot  Alexandromys fortis (reed vole)
Pathway
mfot03420  Nucleotide excision repair
mfot04120  Ubiquitin mediated proteolysis
mfot05161  Hepatitis B
mfot05170  Human immunodeficiency virus 1 infection
mfot05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:mfot00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    126498120
  09124 Replication and repair
   03420 Nucleotide excision repair
    126498120
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    126498120
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    126498120
   05161 Hepatitis B
    126498120
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mfot04121]
    126498120
   03400 DNA repair and recombination proteins [BR:mfot03400]
    126498120
Ubiquitin system [BR:mfot04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Adoptor protein
     126498120
DNA repair and recombination proteins [BR:mfot03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      126498120
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      126498120
SSDB
Motif
Pfam: Beta-prop_RSE1_2nd CPSF_A Beta-prop_RSE1_1st Beta-prop_RIG_2nd Beta_propel
Other DBs
NCBI-GeneID: 126498120
NCBI-ProteinID: XP_049992414
Position
Unknown
AA seq 1146 aa
MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK
IAVMELYRPKGENKDLLFILTAKYNACILEYKQNGESIDIITRAHGNVQGFFPPQDRIGR
PSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQ
APTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQ
ESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGT
VTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFT
NLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLR
SDPSRETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSA
SVRLVSQEPKALVSEWKEPQGKNISVASCNSSQVVVAVGRALYYLQIHPQELRQISHTEM
EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMT
TFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSD
RPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRT
VPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSS
TAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTA
MVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWT
TEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM
SAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVM
QNLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWR
SFHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVE
ELTRIH
NT seq 3441 nt   +upstreamnt  +downstreamnt
atgtcgtacaactacgtcgtaacggcgcagaagcctacagcagtgaacggctgtgtgacc
ggacactttacttctgcggaagatctgaacctgttgattgctaaaaacacaagattagag
atctatgtggtcactgcagaaggccttcggccagtcaaagaggtgggcatgtatgggaag
attgcagtcatggagctttacaggcccaagggggagaacaaagacctgctgttcatcttg
accgctaagtacaatgcctgcatcctggagtataagcagaatggcgaaagcattgacatc
attacaagagcccatggcaatgtccaggggtttttccccccacaggaccgtattggtcgc
ccctcagagactggcatcattggtatcattgaccctgagtgccgaatgattggcctgcga
ctctacgatggccttttcaaggtcattcccctggacagagacaacaaagagctcaaggcc
tttaacatccgcctagaagaattgcacgtcattgatgtcaagttcctgtatggttgtcaa
gcacctaccatttgctttgtctaccaggatcctcaggggcggcatgtgaaaacctatgag
gtgtctctgcgagagaaggagttcaacaagggcccttggaaacaggagaatgtagaagct
gaagcttcaatggtgatcgcagtcccagagccttttggaggtgccatcatcattggacag
gaatcaatcacctaccataatggtgataaatacctggcaattgctcctcctatcatcaag
caaagcactattgtgtgccataatcgggtggatcctaatggctcacgataccttctggga
gatatggaaggacggctcttcatgctgcttttagaaaaggaggagcagatggacggcact
gtcaccctcaaggatctccgagtggaactcctcggagagacctccattgcagagtgccta
acatacctcgataatggtgttgtatttgttgggtctcgcctaggtgactcccagcttgta
aagctcaatgttgacagtaatgaacaaggctcttacgtagtggccatggaaacctttacc
aatttaggacccatcgtggatatgtgtgtggtggacctggagaggcagggacagggtcag
ctggtcacttgctctggggctttcaaggaaggttccttgcggatcatccggaacggaatt
ggaatccatgagcatgccagcattgacttaccaggcatcaaaggtttatggccactgcga
tctgaccccagtcgggagactgatgacactttggtactctcttttgtgggccagacaaga
gttctcatgctaaatggagaggaagtggaagaaacagaactgatgggctttgtggatgat
cagcaaactttcttttgtggcaatgtggctcatcagcaacttatccagatcacttcagca
tctgtgaggttggtctctcaagagcccaaagctttagtcagtgagtggaaagagcctcag
ggcaagaacatcagtgtggcctcatgcaacagcagccaggtggttgttgctgtgggaagg
gcgctgtactaccttcagatccatcctcaggagctccggcaaatcagccacacagagatg
gaacatgaagtggcttgcttggatatcaccccattaggggacagcaatgggctgtcccca
ctttgtgccattggcctctggacagacatttcagcccgtatcttgaagctcccatccttt
gaactactgcacaaggagatgctaggaggagagatcattcctcggtctatcctgatgacc
acctttgagagtagtcactacctcctctgtgccttgggagatggggctcttttctacttt
gggctcaacattgagacaggcttgctgagtgaccgtaaaaaggtgactttgggcacccag
cccacagtgttgaggacattccgttctctttctaccaccaacgtctttgcctgctctgat
cggcccactgtcatctatagcagcaaccacaagttggtcttctccaatgtcaacctcaaa
gaggtgaactatatgtgtcccctcaactcagatggctatcctgacagtctggcactggcc
aataacagcaccctcaccattggcaccatcgatgagatccagaaactccacattcgcaca
gttcccctctacgaatctcccaggaagatttgctatcaggaagtgtctcagtgctttggg
gtcctttccagccgcattgaagtccaagacactagtggaggcacaactgctttgaggccc
agtgccagcacccaggccctgtccagcagcgtcagctccagcaagctattctctagcagt
actgctcctcacgagacctcgttcggagaagaggtggaggtgcacaacctcctcatcatt
gaccagcatacttttgaagtgcttcatgcccatcagtttctacaaaacgagtatgccctc
agcctggtctcctgcaagttgggcaaagaccccaacacatacttcattgtgggcacagcc
atggtatatcctgaagaggcagagcctaagcaaggtcgtattgtggtgttccagtattca
gatggaaaactacagactgtggctgaaaaggaagtgaaaggggctgtgtactctatggtg
gagtttaatgggaagctgcttgccagcatcaacagcacggtgcggctctatgagtggacc
acagaaaaggagctccgcactgagtgtaatcactacaacaacatcatggccctctacctg
aagactaagggtgacttcatcctggtgggcgacctcatgcgctcagtgctgctacttgcc
tacaagcccatggaaggaaactttgaagagattgcccgagattttaatcccaactggatg
agtgctgtggaaatcttggatgatgacaatttcctgggagctgaaaatgcctttaacttg
tttgtgtgccagaaggacagtgctgccaccactgatgaggagcggcagcacctacaggag
gttggtctcttccacctgggcgagtttgtcaatgtgttctgccatggctccctagttatg
cagaatctgggcgagacttctacccctacacagggctcggtgctctttggcacagtcaac
ggcatgatagggctggtgacctcactgtcagagagctggtataacctcctgttggacatg
cagaaccgactcaataaggtcatcaaaagtgtgggcaagatcgaacactccttctggaga
tcctttcacactgagcggaagacagaaccagctacaggcttcatcgatggtgacctgatt
gagagtttcctagatatcagccgccccaagatgcaggaggttgtggcaaaccttcagtat
gatgatggcagtggtatgaagcgagaagcaactgcagatgacctcatcaaagtcgtggag
gagctaactcggatccattag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (11)   

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