KEGG   Alexandromys fortis (reed vole): 126499463
Entry
126499463         CDS       T08493                                 
Name
(RefSeq) antigen peptide transporter 1
  KO
K05653  ATP-binding cassette, subfamily B (MDR/TAP), member 2 [EC:7.4.2.14]
Organism
mfot  Alexandromys fortis (reed vole)
Pathway
mfot02010  ABC transporters
mfot04145  Phagosome
mfot04612  Antigen processing and presentation
mfot05163  Human cytomegalovirus infection
mfot05168  Herpes simplex virus 1 infection
mfot05169  Epstein-Barr virus infection
mfot05170  Human immunodeficiency virus 1 infection
mfot05340  Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:mfot00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    126499463
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    126499463
 09150 Organismal Systems
  09151 Immune system
   04612 Antigen processing and presentation
    126499463
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    126499463
   05168 Herpes simplex virus 1 infection
    126499463
   05163 Human cytomegalovirus infection
    126499463
   05169 Epstein-Barr virus infection
    126499463
  09163 Immune disease
   05340 Primary immunodeficiency
    126499463
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:mfot02000]
    126499463
Enzymes [BR:mfot01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.14  ABC-type antigen peptide transporter
     126499463
Transporters [BR:mfot02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB2, 3, 8, 9, 10 subgroups
    126499463
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N ABC_ATPase AAA_21 AAA_22 AAA_16 AAA_29 AAA_23 AAA_30 AAA_25 AAA_15 Zeta_toxin SRP54 SbcC_Walker_B AAA_18 AAA_33 APS_kinase RsgA_GTPase
Other DBs
NCBI-GeneID: 126499463
NCBI-ProteinID: XP_049994645
Position
Unknown
AA seq 703 aa
MAALAWLAAALLLLVDWLLLRPGLPGIFSLLVPELPLLRVWAVGLSRWAILRLGVRRVLG
VTTEAHGWSAVLPPLAAALGLAQPGLALFRELASWGALRDGDNVGVLYWGSRLDAFALSY
VAALPAAALWYKLGSLWAPSSRRGAGDMVCRLLGFLGSEKRRLHLVLMLLVLSCLGEMAI
PFFTGRITDWILQDKTAPSFARNIWLMSVLTIASTVLEFTGDAIYNLTMGHMHSRAHGEV
FRAVLCQETGFFLQNPAGSITSRVTEDTSNVCESVSDKLNLLMWYLGRGLCLLAFMFWGS
LYLTLVTLLTLPLLFLLPRKLGKVHQSLQMKVQESLAKSSQVAIEALSAMPTVRSFANEE
GEALKFRQKLEEMKTLNKKEALAYVAEVWTVNVRSDLLSCSVLPPPTFHSAMQVLLSIYP
WMQKAVGSSEKIFEYLDRTPCSPLSGSLAPLNMEGLVEFQDVSFAYPNHPDVQVLQGLTF
TLHPGKVTALVGPNGSGKSTVAALLQNLYQPTGGQVLLDGQPLVQYDHHYLHNQVAAVGQ
EPLLFGRSFRENIAYGLIRTPTMEEIRAVAMKSGAHDFISGLPEGYDTEVGETGNQLSGG
QRQAVALARALIRKPRLLILDDATSALDANNQLRVQRLLYENRGPASPAVLLITQQLSLA
EQAHHILVLKDGSVCEQGSHLQLMEKSGGCYRAMVEALGAPSD
NT seq 2112 nt   +upstreamnt  +downstreamnt
atggctgcgcttgcttggctggcggccgcgctgctgctgctggtcgactggctgctgctg
cggcccgggctcccgggaatcttctccctgctggttccggagttgcccctgctccgggtc
tgggcggtgggcctgagtcgctgggccatcctgaggctgggggtccgccgggtcctcggt
gtcaccacggaagcccatggatggtcggctgttttgccgccactggcagcggcgctgggt
ttagctcagccgggacttgccttattcagagagctggcctcctggggagcgctccgggac
ggtgacaacgttggagtactgtactggggcagtcgcctcgacgctttcgctctcagttat
gtggcagcattgcccgctgccgcgctatggtacaagttggggagcctctgggcgcccagc
agccgcaggggtgctggagacatggtgtgtcgactgttaggcttcctgggttccgagaag
cggcgcctccacctggttctgatgctcttggtcctctcctgccttggggaaatggcgatt
cccttcttcaccggccgcatcactgactggattcttcaggataagacggctccgagcttt
gcccgcaacatctggctcatgtccgttctcaccatagccagcacagtgctggagtttact
ggagatgctatctacaacctcaccatgggccacatgcacagccgtgcacacggagaggtg
ttccgggctgtcctttgccaggagacggggtttttcctgcagaacccagcaggttccatc
acatctcgggtaacggaggacacatccaatgtctgtgagtctgtcagtgacaagctgaac
ctgctgatgtggtacctggggcgaggcctgtgtctcctggccttcatgttttgggggtcg
ctgtacctcactttggtcactctgctcaccctgcccctgcttttccttctgcctcggaag
ctggggaaagtgcaccagtcattgcaaatgaaggtgcaggagtctctagcgaagtcctca
caggtggccatcgaggccctgtcagcgatgcctacggtgcggagcttcgccaacgaggag
ggagaggccctgaagtttaggcagaaactggaggaaatgaagacgctcaacaagaaggag
gccttggcctatgtagccgaagtctggaccgtgaatgtcaggtcagacctgctttcctgc
tccgtcctgcccccacccacattccactctgctatgcaggttctgctctccatctatccc
tggatgcagaaggctgtgggctcctcagagaaaatatttgaatacctggaccggactcct
tgttctccactcagtggctcgttggcacccttaaacatggaaggtcttgtcgagttccag
gacgtctcctttgcctacccaaaccatcccgatgttcaggttcttcagggcctgacgttc
acactgcaccctggaaaggtgacagcgttggtggggcccaacgggtccgggaagagcacc
gtggctgccctgctgcagaatctgtaccagcccacagggggccaggtgctgctggacggc
cagcccctggtccagtatgatcaccactacctgcacaaccaggtggccgcagtgggacaa
gagccactgctatttggaagaagtttccgagaaaatattgcctatggcctgatccggact
ccaaccatggaggaaatcagagctgtggccatgaagtctggagcccacgatttcatctct
ggactccctgagggctatgacacagaggtgggtgagactgggaaccagctgtcagggggt
cagcgacaggcagtggccttggcccgagctttgatccggaagccacgcctgcttatcttg
gacgatgccaccagtgccctggatgccaacaaccagctacgggtccagcggctcctctat
gagaaccggggaccggcttctccagcggtgctgctaatcacgcagcagctcagcctggcg
gagcaggcgcaccacatcctcgttctcaaagacggctccgtctgcgagcagggcagccat
ctgcagctcatggagaagagcggagggtgctaccgggccatggtggaggctcttggggct
ccttcagactga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (19)   
   Pfam (19)   
All databases (23)   

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