KEGG   Alexandromys fortis (reed vole): 126502628
Entry
126502628         CDS       T08493                                 
Name
(RefSeq) U3 small nucleolar RNA-associated protein 4 homolog isoform X1
  KO
K14548  U3 small nucleolar RNA-associated protein 4
Organism
mfot  Alexandromys fortis (reed vole)
Pathway
mfot03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:mfot00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    126502628
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mfot03009]
    126502628
Ribosome biogenesis [BR:mfot03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    126502628
SSDB
Motif
Pfam: Beta-prop_EML_2 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st WD40 WDR55 ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_EML Beta-prop_HPS5 Beta-prop_WDR90_POC16_2nd Beta-prop_Vps41 WD40_MABP1-WDR62_2nd Beta-prop_NUP159_NUP214 Beta-prop_WDR75_1st EIF3I Beta-prop_TEP1_2nd PROPPIN Beta-prop_RSE1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR19_1st Beta-prop_SPT8 Beta-prop_WDR35_TULP_N Beta-prop_IFT122_1st DUF7165 Frtz Beta-prop_TEP1_C CPSF_A PQQ_2 DUF1513
Other DBs
NCBI-GeneID: 126502628
NCBI-ProteinID: XP_049999742
Position
Unknown
AA seq 686 aa
MGEFKVHRVRFFNYVPSGIRCVAYNNQSNRLAVSRTDGTVEIYNLSANYFQEKFFPGHES
RATEALCWAEGQRLFSAGLNGEILEYDLQALNIKYALDAFGGPIWSMTASPSGSQLLVGC
EDGSVKLFEVTPDKIQFARNFDRQKSRILSLSWHPAGTHIAAGSIDYVIVFDVKSGSITR
KMVLDRQHLGVTKSRCIVWGVAFLSDGTVISVDSVGKVQLWDSATGTLVKSHVIANADVQ
SIAVADQEDSFVVGTAEGTVFHFQLVPVTSSSSEKQWVRTKPFQHHTHDVRTVAHSPTAL
ISGGTDTHLVIRPLMEKVEVKNYDAALRKITFPHRRLISCSKRRQLLLFQFAHHLELWRL
GSTVATGKNGDTLPLSKNADHLLHLKTKGPENISCSCVSPCGSWIAYSTASRFFLYRVKY
ERGNISLQRVSKMPAFLRSALHILFSEDSTKLFVASNQGSLHIIHLLEGNFKHLHTFQPQ
SGTVEAMCLLAVSSDGNWLAASGTSAGVHVYDLNHLKLHCTVPAYNFPVTALAIAPNTNN
LVIAHSDQQVFEFSIPDKQYTEWSRAVQKQGFHHLWLQRDTPITHISFHPKRPMHILLHD
TYMFCIIDKSLPLPNDKTLLYNPLPPKNESDVFLRRTAHAFKISKIYKPLLFMDLLDERT
LVAVERPLDDIIAQLPPPIKKKKFGT
NT seq 2061 nt   +upstreamnt  +downstreamnt
atgggtgaatttaaggtccatcgagtacgtttctttaattatgttccatcaggcatccgc
tgcgttgcttacaataaccagtcaaacagattggctgtctcacgaacagatggcacagtg
gaaatttataacttgtcagcaaactactttcaggagaaatttttcccaggtcatgagtct
cgggctacagaagccctatgttgggcagaaggacagcggctctttagtgctggactcaac
ggagaaattctcgagtatgacctacaggcactaaacataaagtatgctctggatgccttc
ggaggacctatttggagtatgaccgccagccccagtggctctcagcttttggtcggatgt
gaagatggctctgtgaaactgtttgaggtcactccagacaaaatacagtttgcaagaaat
tttgatcggcagaaaagtcggatcctaagtctcagctggcatcctgctggtacccacatt
gcagctggctccatagactacgttatcgtgtttgatgtcaaatcagggagcattactcgt
aagatggttttagataggcagcacctgggagtgacgaagtcaaggtgtattgtgtggggc
gttgccttcttgtccgatggaactgtcataagtgtggactctgttggaaaggtgcagtta
tgggactcagctacggggacacttgttaagagccatgtcatcgcaaatgcggatgtgcag
tctattgctgtcgctgatcaagaagacagttttgtggtgggcacagccgaaggcacagta
ttccattttcagctggtccccgtgacttccagcagcagtgagaagcagtgggtgcggaca
aagccgttccagcatcacactcacgatgtgcgcactgtggcccacagcccgacagctctg
atatcaggaggcacagacacacacctagttattcgtcctctcatggagaaagtggaggta
aagaattacgatgctgccctccggaagatcacttttccccatcgtcgtctcatttcctgt
tcaaaaagaaggcagcttctcctcttccagtttgctcatcacttggagctttggagacta
ggatctacagttgcaacaggcaagaacggagacactcttccactctctaaaaacgcagac
catctgctgcacctcaagacaaagggccctgagaacattagctgcagttgtgtttccccg
tgtggaagctggatagcctattctacagcctctcggttttttctctatcgagtgaaatat
gaacgtggcaacataagcctccaaagagtttccaaaatgccagcgttccttcgctctgcc
ctccatattttgttttctgaagattcgacaaagctctttgtggcatcaaatcaagggtct
ctgcatatcattcatctgctggaaggaaacttcaagcatttgcatactttccagcctcaa
tcagggacagtggaggccatgtgtcttttagcagtcagttcagatgggaattggctagct
gcatcaggtaccagtgctggagtccacgtatacgatctgaatcatctaaagctccactgc
acagtccctgcttacaactttccagtgactgctctggccatcgcccccaacaccaacaac
cttgtcattgctcattctgaccaacaggtatttgagttcagtatcccagacaagcagtat
acagagtggagccgagctgtccagaagcagggatttcaccatctatggctccagagggat
actcccatcacacacatcagcttccatcccaagagaccgatgcacattctccttcatgat
acctacatgttctgcatcattgacaagtccttgccacttccaaacgacaaaactctgctc
tataatccacttcctcccaaaaatgaatccgacgtcttcctgaggcgcacagcccatgca
tttaaaatttctaagatatataagcccctactcttcatggatctcttggatgaaaggaca
cttgtggcagtagaacgacccctggacgacatcattgctcagctcccaccacccatcaaa
aagaagaaatttggaacttaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (30)   
   Pfam (30)   
All databases (36)   

Download RDF
DBGET integrated database retrieval system