KEGG   Alexandromys fortis (reed vole): 126503244
Entry
126503244         CDS       T08493                                 
Name
(RefSeq) DNA polymerase lambda isoform X1
  KO
K03512  DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
Organism
mfot  Alexandromys fortis (reed vole)
Pathway
mfot03410  Base excision repair
mfot03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:mfot00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    126503244
   03450 Non-homologous end-joining
    126503244
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mfot03400]
    126503244
Enzymes [BR:mfot01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     126503244
DNA repair and recombination proteins [BR:mfot03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     126503244
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    X-family DNA polymerases
     126503244
SSDB
Motif
Pfam: DNA_pol_B_palm DNA_pol_B_thumb DNA_pol_lambd_f HHH_8 HHH_5 NTP_transf_2 BRCT_2 HHH PAG PTCB-BRCT BRCT
Other DBs
NCBI-GeneID: 126503244
NCBI-ProteinID: XP_050000746
Position
Unknown
AA seq 573 aa
MDPQGILKAFPKRKKIRADPSSKALAKVPRKEAGDAGDWLSSLRAHIMPTGIGRARAELF
EKQILHHGGQICSAHAPGVTHIVVDENMDCERALRLLRLPQLPPSAQLVKSSWLSLCLQE
RRVVDTAGFSLSIPESSSNQPQPSKTDQGSSAPGTQEAVSRTTFSPPPPHIGAASSPKKT
EKAPRTPAQLSSDDETSDEEGPQVSSADLEALISGHYPTPPEEDGGPHPAPAALEKWVCA
QPSSQKATNYNLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPVSSYQEACSI
PGIGKRMAEKIKEILESGHLRKLDHISDSVPVLELFSNIWGAGTKTAQMWYHQGFRNLED
IRRLDSLTAQQVVGLKHYDDFLERMPREEAAEIEQTVRTSAQAFNSGLLCVACGSYRRGK
KTCGDVDVLITHPDGRSHQGIFSRLLDSLRQQGFLTDDLVSQEENGQQQKYLGVCRLPGP
GQRHRRLDIIIVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSAAVVRNSQG
VKVGPGRVLPTPTERDVFKLLGLPYREPAERDW
NT seq 1722 nt   +upstreamnt  +downstreamnt
atggatccccaggggatcttgaaggcatttcccaaacgaaagaaaattcgtgcagatcca
tcatcaaaagccctggcaaaggttcccagaaaggaggcgggagatgctggagattggctg
agctccctgagggctcacattatgcccactggcattggacgagcccgggccgagctcttt
gagaagcagattctccatcacggtggccagatatgctctgcccacgccccaggagttact
cacatcgtggtggatgaaaacatggactgtgagcgggctcttcggctcctcagactcccc
cagctaccccccagtgctcagctggtgaagtcatcctggctgagcttgtgcctgcaggag
agaagggtggtggacacagctggattcagtctctccatccccgagagttcctccaaccaa
ccacagcccagcaagacagaccaaggctcttctgctcctggtacccaggaagctgtatcc
aggacgaccttctctcccccccctcctcacatcggagctgcatcttctcccaaaaagaca
gagaaggcgccaagaaccccagcccagctcagctcagatgatgaaaccagtgatgaggaa
ggaccccaggttagctcagcagatctggaagccttgatcagtgggcactaccccactccc
cctgaagaagatggtgggccccacccagccccagcagccctggagaagtgggtctgtgca
cagccctcgagccagaaggccactaattacaacctgcacatcacagagaagctagaagta
ctggctaaagcctacagtgtccagggagacaagtggagggccctgggctatgccaaggcc
atcaatgccctcaagagcttccacaagcctgtcagctcctaccaggaggcctgcagcatc
cctggaattgggaagcggatggctgagaagatcaaggagatcctggagagcgggcatctg
cggaagctagaccacatcagtgacagtgtgcctgtcttggagctcttctccaacatctgg
ggagctgggactaagactgcccagatgtggtaccatcagggtttccggaatctagaagac
atccgaaggctggactcactgactgctcagcaggtcgttggcttgaagcactacgatgac
ttcctggagcgcatgcccagggaggaggctgcagaaattgagcagacagtccggacatca
gcccaggcctttaattctgggctgctgtgtgtggcctgtggctcttatcgaagggggaag
aagacctgcggggatgtggatgtgctcatcactcacccagatggccggtcccaccagggc
atcttcagccgcctccttgacagccttcggcagcaagggttcctcacagatgacctggtg
agccaggaggagaatggccagcagcagaagtacttgggtgtgtgccggctcccagggccc
gggcagcggcaccggcgactggacattatcatcgtgccctacagtgagtttgcctgtgcc
ctgctctacttcactggctctgcccacttcaaccggtccatgcgagctctggccaagacc
aagggcatgagcttgtcggagcatgccctcagcgcagctgtggtccggaacagccaaggt
gtcaaggtggggcctgggcgcgtgctgcccacccccacagagagggacgtcttcaagctc
ttaggcctgccctaccgagagccagctgagcgggactggtaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (6)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (11)   
   Pfam (11)   
All databases (25)   

Download RDF
DBGET integrated database retrieval system