KEGG T08493: 126514993

Alexandromys fortis (reed vole): 126514993

Entry

126514993         CDS       T08493

Name

(RefSeq) cholesterol transporter ABCA5

K05648

ATP-binding cassette, subfamily A (ABC1), member 5

Organism

mfot Alexandromys fortis (reed vole)

Pathway

mfot02010

ABC transporters

Brite

KEGG Orthology (KO) [BR:mfot00001]
09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    126514993
09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:mfot02000]
    126514993
Transporters [BR:mfot02000]
ABC transporters, eukaryotic type
  ABCA (ABC1) subfamily
   ABCA5, 6, 8, 9, 10 subgroups
    126514993

SSDB

Motif

Pfam:

ABC_tran ABC2_membrane_3 AAA_21 R1_ABCA1 RsgA_GTPase AAA_29 AAA_23 Dynamin_N Rad17

Other DBs

NCBI-GeneID:

126514993

NCBI-ProteinID:

XP_050020243

Position

Unknown

AA seq 1637 aa
MATAIRDVGVWRQTRTLLLKNYLIKCRTKKSSVQEILFPLFFLFWLILISMMHPNKKYEE
VSDIELNPMDKSSLSNLILGYTPVDNITSSIMQRVSSDHLPDVIITEEYANEKEMLASSL
SKSSNFVGVVFKDTMSYELRFFPDVIPVSSIYMDSRGMLGFYIQATISDLWLSWIELVFV
GQWKTNVSLWKELESTKAVIMGEAAVVEIDTFPRGVILIYLVIAFSPFGYFLAIHIVAEK
EKKLKEFLKIMGLHDTAFWLSWVLLYTSLIFLMSLLMAVIATASSLFPQSSSLVIFLLFF
LYGLSSVFFALMLTPLFKKSKHVGVAEFFFTVAFGFVGLLIVLMESSPKSLVWLFSPFCQ
CTFLIGIAQVMHLEDFNEGALFSNLTEGPYPLIITIIMLALDSVFYVLLAVYLDQVIPGE
FGLRRSSLYFLKPSYWSKTKRNYKELSEGNINGNISLSEIVEPVSSEFIGKEAIRISGIQ
KAYRKKNENVEALRNLSFDIYEGQITALLGHSGTGKSTLMNILCGLCPPSDGFASIYGHR
VSEIDEMFEARKMIGICPQLDINFDVLTVEENLSILASIKGIPANNIIQEVQKVLLDLDM
QAIKDNQAKKLSGGQKRKLSLGIAVLGNPKILLLDEPTAGMDPCSRHIVWNLLKYRKANR
VTVFSTHFMDEADILADRKAVISQGMLKCVGSSIFLKSKWGIGYRLSMHIDRYCATESLS
SLVRQHIPAAAVLQQNDQQLVYSLPFKDMDKFSGLFSALDIHSNLGIISYGVSMTTLEDV
FLKLEVEAEIDQADYSVFTQQPLEEEIDSKSFDEMEQSLLILSETKASVSSMSLWRQQVS
TIAKFHVLALKRESKSVRSVLLLLLIFFAVQIFMFLVHHSFKNAVVPIKLVPDLYFLKPG
DKPHKYKTSLLLQNSTDSDINDLINFFTHQNIMVTMFNDSDYVSAAPHSAALNVVLAEKD
YVFTAVFNSTMVYSLPVMMNIISNYYLYHLNVTEAIQIWSTPFIQEITDIVFKVELYFQA
ALLGIIVTAMPPYFAMENAENHKIKAYTQLKLSGLLPSAYWVGQAVVDFPFFFVVLALML
GSLFAFRHGLYFYPVKLLAVVLCLIGYVPSVVLFTYVASFTFKKILNTKEFWSFIYSVTA
LVCIAITEITFFLGYSASTVFHYTFCIAIPIYPLLGCLISFIKGSWKNISKTEETYNPWD
RLLVAVIMPYLHCILWIFLLQHYEKKHGGRSIRKDPFFRTLSQKSKNKKFPEPPINADED
EDVKAERLKVKELMSCQCCEEKPAIMVCNLHKEYDDKKDFLHSRKTKKVATKYVSFSVRK
GEILGLLGPNGAGKSTIINILVGDIEPTSGQIFLGDYISHSSEGDESTKCMGYCPQTNPL
WPDITLQEHFEIYGAVRGMSASDMKEVISRITNALDLKEHLQKTIKKLPAGIKRKLCFAL
SMLGNPQVTLLDEPSTGMDPRAKQHMWRAIRTAFKNKKRAALLTTHYMEEAEAVCDRVAI
MVSGQLRCIGTVQHLKSKFGKGYFLEIKLKDWIENLEIDRLQREIQYIFPNASRQESFSS
ILAFKIPKEDVQSLSQSFAKLEEAKHTFAIEEYSFSQATLEQVFVELTKEQEEEDNSCGT
LNSTLWWERTQEDRVVF

NT seq 4914 nt +upstreamnt +downstreamnt
atggctactgcaattagggatgtgggagtttggagacagactagaacacttctgctgaaa
aattacttaattaaatgcaggactaaaaaaagtagcgttcaggaaattctttttcctcta
ttttttttattttggctaatattaattagcatgatgcatccaaacaagaaatatgaagaa
gtatctgatatagaacttaaccccatggacaaatctagcctttctaaccttattcttgga
tatactcctgtggataatattacaagcagcatcatgcaaagagtatcttctgatcatctt
cccgatgttataattactgaagaatatgcaaatgagaaagaaatgctagcatctagtctt
tctaagtcaagcaactttgtaggtgtggttttcaaagataccatgtcttatgaacttcgt
ttttttcctgatgtgattccagtgtcttctatttatatggattcaagagggatgcttggc
ttctacatacaagccaccatatctgacttgtggctttcgtggatagaacttgtgtttgtg
gggcagtggaagaccaatgtttccctatggaaggagctggagtcaaccaaggctgttatc
atgggagaagctgccgttgtagaaatagacactttcccccgaggagtcattttaatctat
ctggtcatagctttctcaccgttcggctactttttggcaattcacattgtagcagaaaaa
gaaaaaaagctaaaggaatttttaaagataatgggacttcatgacactgctttttggctt
tcctgggttcttctgtatacaagtttgattttcctcatgtcacttcttatggcagtcatt
gctacagcttcttccttattccctcagagtagcagccttgtgatttttctactgttcttc
ttatatggattatcatctgtgttttttgctttaatgctgacacctctttttaaaaaatct
aagcacgtgggagtagctgagtttttcttcactgtggcgtttggatttgttggccttttg
atagtcctcatggaaagctcccccaaatctctagtgtggctcttcagtcctttctgtcag
tgtacctttctgatcggtattgcccaggtcatgcatctagaagatttcaatgaaggcgcc
ttgttttctaatctgacggaaggcccctatcctctaatcattactattatcatgcttgct
cttgacagtgtattctatgtcctcctggctgtgtatcttgatcaagtcattccaggggaa
tttggcttaaggagatcatctttatactttctaaaaccatcatattggtcaaaaaccaaa
agaaattataaggagctatcagagggcaacattaatgggaatattagtcttagtgaaatt
gttgagcctgtttcttcagaattcataggaaaagaagctataagaataagtggtattcag
aaggcctatagaaaaaaaaacgaaaacgtggaagctttgagaaatttgtcatttgacata
tatgaaggtcaaattactgcattactgggtcatagtggaacaggaaaaagtacattgatg
aatattctttgtggattgtgcccgccttctgatgggtttgcttctatatatggacacaga
gtctctgaaatagatgaaatgtttgaagcaagaaaaatgattggcatttgtccacagtta
gatataaactttgatgttttgacagtagaagaaaatttatcaattttggcttcaatcaaa
ggaatcccagccaacaatataattcaagaagtgcaaaaggttttactggatttggatatg
caagccatcaaagataaccaggcaaaaaaactaagtggtggccaaaaaagaaaactatct
ttaggaattgcagttcttgggaatccaaagatactgttgctagatgaaccaacagcaggg
atggacccctgctctcgtcatattgtttggaatctccttaaatacaggaaggctaacaga
gtgacagtattcagtactcattttatggatgaagctgacattcttgctgataggaaggct
gtcatatcgcaaggaatgctgaaatgtgttggttcttcaattttcctaaaaagtaaatgg
ggaatcggctaccgcctgagcatgcacattgacagatactgcgccacggagtcgctgtcc
tccctggttaggcagcacattcctgcagccgctgtgctgcagcagaatgaccagcagctg
gtgtacagcttgcctttcaaagacatggacaaattttcaggcttgttttctgctctagac
attcattcaaatctgggcattatttcatatggtgtttccatgacgacattggaagatgta
ttcttaaagttagaagttgaagcagaaattgatcaagcagattatagcgtgtttacacag
cagccactggaagaagaaatagactcaaaatctttcgatgaaatggaacagagtttactt
attctttctgaaaccaaagcttcagtgagcagcatgagcctttggagacagcaggtgtct
acaatagcgaagttccatgtcctcgcactgaagcgggaaagcaagtctgtgcgctcggtg
ttgcttctgcttttaattttttttgcagttcagatttttatgtttttggtacatcattct
tttaaaaatgctgtggttcccatcaaacttgttccagacttgtatttcctaaaacctgga
gataaacctcataaatataaaacaagcctgctgcttcaaaattctactgactcagatatc
aatgatcttattaactttttcacacaccagaacataatggtgacaatgtttaatgacagt
gactatgtgtctgctgctccccatagtgcagctttaaatgtggtgcttgcagaaaaggac
tatgtttttacggctgttttcaacagtactatggtttattctttaccagtaatgatgaac
atcattagtaactactatctttatcatttaaatgtgactgaagctatccagatctggagt
accccattcattcaagaaattactgatatagtctttaaagttgaactatattttcaagca
gctttgcttggcattatcgttactgcaatgccaccttactttgccatggagaatgcagag
aatcataagatcaaagcttatactcaacttaaactttcaggtcttttgccatcagcctat
tgggttggacaagctgtggtggattttccctttttctttgttgttctggctttgatgctg
ggaagtttatttgcatttcgtcatggattgtatttttatcctgtaaaacttcttgctgtg
gttctctgccttattggttatgtaccttcagttgttctcttcacctacgtggcttctttc
acctttaagaaaattttaaataccaaggaattttggtcatttatctattctgtgacggca
ttggtgtgtattgcaatcactgaaataactttctttttgggatattcagcgtcaactgtt
tttcattataccttttgcatagccattccaatctacccactcctgggctgcctaatttct
ttcataaagggttcttggaagaatatatcaaaaaccgaggaaacctacaacccatgggat
aggcttttagttgctgttataatgccctacctgcactgtatactgtggattttcctctta
caacactatgagaaaaagcatggaggcagatcaataagaaaggatccctttttcaggacc
ctctcacaaaagtccaaaaataagaagtttccagaaccaccaatcaatgcggatgaagat
gaagatgtcaaagctgaaagactgaaggttaaagagctgatgagctgccagtgttgtgag
gagaagccagccattatggtatgcaatttgcataaagaatatgatgataagaaagatttt
cttcattcaagaaaaacaaagaaagtagcaacaaaatacgtctcattctctgtgagaaaa
ggagagatcttgggactgttgggtccaaatggtgctggcaaaagcacaatcattaatatt
ctggttggggatattgaaccaacttcaggccagatatttctaggtgattatatttcacat
tccagtgaaggcgatgaatccactaagtgcatgggttactgccctcaaacaaacccactg
tggccagatattactctgcaagaacactttgaaatttatggagctgtgagaggaatgagt
gcaagcgacatgaaagaagtaataagtcgaataacaaatgcccttgatttgaaggaacat
cttcagaaaactataaagaagctgcctgcagggatcaagcgaaagctgtgttttgctctc
agtatgctggggaacccacaggttaccctcttggatgagccgtccacaggcatggacccc
agagccaaacagcacatgtggagagcaatcagaactgcatttaaaaacaaaaagcgggct
gcccttctgacgactcattacatggaagaggcggaggctgtctgtgacagagtggcaatt
atggtgtctgggcagttaagatgtattggaacagtacaacatctaaagagtaagtttggc
aaaggctactttttggaaattaaattaaaagactggatagaaaacctggaaatagaccgc
cttcaaagagaaattcaatatattttcccaaatgcaagccgccaagagagcttttcttct
attttggcctttaaaattcctaaagaagatgttcagtccctctcacaatcctttgctaag
ttggaagaagcaaaacacacttttgccatagaagaatatagcttttctcaagcaacattg
gaacaggtttttgttgaacttaccaaagaacaagaagaagaagataatagctgtgggact
ttgaacagcacactctggtgggaaagaacacaggaagatagagtagtgttttga

All links

Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (13)   

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