KEGG T10698: CHE218

Microbacterium sp. che218: CHE218_15720

Entry

CHE218_15720      CDS       T10698

Name

(GenBank) DNA-directed RNA polymerase subunit alpha

K03040

DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]

Organism

micm Microbacterium sp. che218

Pathway

micm03020

RNA polymerase

Brite

KEGG Orthology (KO) [BR:micm00001]
09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CHE218_15720
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:micm03021]
    CHE218_15720
   03400 DNA repair and recombination proteins [BR:micm03400]
    CHE218_15720
Enzymes [BR:micm01000]
2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     CHE218_15720
Transcription machinery [BR:micm03021]
Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     CHE218_15720
DNA repair and recombination proteins [BR:micm03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      CHE218_15720

SSDB

Motif

Pfam:

RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L HHH_5 SAM_EPH

Other DBs

NCBI-ProteinID:

BFM24530

Position

complement(1664473..1665462)

AA seq 329 aa
MLIAQRPTLTEEKIGEFRSRFVIEPLEPGFGYTIGNALRRSLLSSIPGAAVTSIRIDGVL
HEFSTIPGVKEDVTEIILNIKQLVVSSERDEPITAYLRKTGAGEVTAADISAPAGVEVHN
PELVIATLNDTAKFELELTIERGRGYVSATQNRNEYAEAGQIPIDSIYSPVLKVSYRVDA
TRAGERTDFDKLVLDVESKASIAPRDAVASAGRTLTELFGLARELNVEAEGIEIGPAPVE
TVLSNELSMPIEDLDLSVRSYNCLKREGINTVSELVALSETQLMNIRNFGQKSVDEVRDK
LTSLGLSLKDSVPGFDGAQFYSGYDEETV

NT seq 990 nt +upstreamnt +downstreamnt
gtgctcatcgcacagcgtcccactctgaccgaggagaagatcggggagttccgcagccgt
ttcgtcatcgagccgctggagcccggcttcggttacacgatcggcaacgcgctgcgtcgc
agcctcctgtcgtcgatccccggcgcggccgtcacgagcatccgcatcgacggcgtcctg
cacgagttcagcaccatcccgggcgtgaaggaagacgtcaccgagatcatcctgaacatc
aagcagctggtcgtctcgagcgagcgcgacgagcccatcacggcgtacctgcgcaagacc
ggcgccggtgaggtcaccgccgccgacatctccgctcccgcgggtgtcgaggtgcacaac
cccgagttggtcatcgcgacgctcaacgacaccgccaagttcgagctcgagctgacgatc
gagcgtggccgcggctacgtctcggcgacccagaaccgcaacgagtacgccgaggccggt
cagatcccgatcgactcgatctactcgcccgtgctcaaggtcagctaccgcgtcgacgcc
acccgtgccggtgagcgcaccgacttcgacaagctcgtcctcgacgtcgagtcgaaggcc
tcgatcgccccgcgcgacgccgtggcctccgccggccgcaccctcaccgagctgttcggc
ctcgcccgcgagctgaacgtcgaggccgagggcatcgagatcggccccgcgccggtcgag
accgtcctctcgaacgagctgtcgatgccgatcgaagacctggacctctcggtccgctcg
tacaactgcctcaagcgcgagggcatcaacaccgtttcggagctggtcgccctttcggag
acgcagctgatgaacatccgcaacttcggtcagaagtcggtcgacgaggtgcgcgacaag
ctcacctccctcggcctgtcgctcaaggactcggtgcccggcttcgacggcgcccagttc
tacagcggctacgacgaagaaaccgtctga

All links

Gene (1)   
   NCBI-PROTEINID (1)   
Protein domain (5)   
   Pfam (5)   
All databases (6)   

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