KEGG   Mangifera indica (mango): 123212715
Entry
123212715         CDS       T07684                                 
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
minc  Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:minc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:minc03041]
    123212715
Spliceosome [BR:minc03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    123212715
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    123212715
SSDB
Motif
Pfam: MA3 MIF4G
Other DBs
NCBI-GeneID: 123212715
NCBI-ProteinID: XP_044487792
Position
4:complement(11642401..11648653)
AA seq 764 aa
MAGLKESRRDRGRERSRREESGEESDGDCRRDRKRERRHRDESGEESDGEHRRDKEKERR
RPKESAEESDDERRREREKRRRLRDESGEGKKHLEYANRDRHRERIRDESGRDRDRRRRS
ERDEDDWKQRKKDEGRDGQSDRDKEKEKDRKREDNQREEGELVEDSKKSNLHEENVNANG
NANLSLGRSGGVYIPPFKLARMMKEVEDKSSVEYQRLTWDALRKSINGLVNKVNATNIKN
IIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALAAVVNTKFPEVGLLLLRRIVLQ
FQRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLMLLLTKPTDDSVEVAVGFVTEC
GSILQDLSPRGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAKFQGYPAVRPELDLV
EQEDQFTHEISLDDKVDPEITLDIFKPDPQFLENEKRYEELKKTILGEESDDEEGSDAAS
GDEDDDDDDESEEDDEEQMQINDETETNLVNLRRTIYLTIMSSVDFEEAGHKLLKIKLEP
GQEMELCIMLLECCSQERTYLRYYGLLGQRFCMINKVHQENFEKCFVQQYSMIHRLETNK
LRNVAKFFAHLLGTDALPWHVLAYIRLTEEDTTSSSRIFIKILFQELSEHLGIRLLNERL
TDPIMQDSFESIFPKDNPKNTRFSINFFTSIGLGGITENLREYLKNMPRLIMQQQKPASE
SESGSADESGSSSSSDSETASSDSESSSSEDEQDRRRRKRTRRH
NT seq 2295 nt   +upstreamnt  +downstreamnt
atggctggacttaaagagagtaggagagatagaggaagggaaagaagtcgtcgagaggaa
agtggagaggaaagtgatggtgactgtaggagagataggaaaagggagagaagacatcga
gatgagagtggcgaggaaagcgatggtgagcacaggagagataaggaaaaagagagaaga
cgtccaaaggagagtgcagaggaaagtgacgatgagcggagaagagaaagggaaaaacgg
agaagacttcgggatgagagtggagagggaaagaagcatcttgaatatgcaaatcgggac
aggcatagggagagaatacgagatgagagtggtagagatagggataggcgtagaagatca
gagagggatgaggatgattggaagcaaagaaagaaagacgagggtagagatggccaatct
gatagagataaggaaaaggagaaggataggaaacgcgaagacaatcaaagggaagagggg
gagttggttgaggattccaaaaaatccaatttgcatgaggagaatgtgaatgctaatggt
aatgcaaatttgagtttagggagaagtggaggggtttatatcccaccttttaagttggca
aggatgatgaaggaggtggaagataaaagcagtgttgagtaccagcgtttgacatgggat
gctcttcgtaagagtataaacgggcttgttaacaaagttaatgctactaacataaagaat
atcattccagaattgtttgcagagaatctgattagaggaagaggtcttttttgtcggtcg
tgtatgaaatcacaaatggcatctcctggttttaccgacgtgtttgcagctttggccgct
gttgttaacaccaaatttccggaggtgggtttgcttttgctgagaaggattgttttgcag
ttccagagagcttataagcggaatgacaagccacaattactagcagcagtcaagtttata
gcacatttggtaaatcagcaagtggctcatgagattattgctctagagttgctcatgctt
ctgctgaccaaaccaacagatgacagtgtggaagtagctgttggttttgtcactgagtgt
ggatcaatacttcaagatctttcaccaagaggacttcatggtatttttgagcggtttcgt
ggaattcttcatgaaggagagatagacaaacgtgtccagttcttgattgaaggactgttt
gctataaggaaagccaaatttcagggttacccagctgttcgtccagagttggaccttgta
gagcaggaagatcaatttacacacgagatatcccttgacgataaggtggatccagagatt
acacttgatattttcaaaccagatcctcagttcctggagaatgaaaaacgttatgaagaa
ttgaagaaaacaatcctaggtgaggagtctgatgatgaggaaggctctgatgcagcttca
ggtgatgaggatgatgatgacgacgatgagtctgaagaagatgatgaagagcagatgcaa
ataaacgacgaaactgaaacaaacctagtaaatcttcggaggacaatttatctaacaatc
atgtctagtgtagattttgaagaggctggccacaaacttctgaaaatcaaactagagcct
ggtcaagagatggagttgtgtataatgctcttggagtgttgcagtcaggagagaacttac
cttcggtattatggtcttttggggcagcggttttgcatgataaacaaagtccatcaagaa
aattttgagaaatgcttcgtccagcaatattcgatgattcatcgccttgaaaccaacaag
ttacgtaatgttgccaagttttttgcccatttacttggaacagatgctttgccttggcat
gttttggcctatattcgtttaactgaggaggacacgacttcttcttcccgaatcttcata
aagattctcttccaggaattgtcggagcatcttggcattcgattgctgaatgagaggctt
acagatcccataatgcaagactcatttgaatccattttccctaaggacaatccaaagaac
acgcggttttccatcaacttcttcacatccattgggctcggtggcatcactgaaaacttg
cgtgaatacctaaagaacatgccaaggctcataatgcaacaacaaaaacctgcttcagaa
tcagaatcaggatcggctgatgaatctggtagttctagttcatctgattcagagacagct
agctcagactccgaatcatcaagttctgaagatgaacaggacagaagacgcagaaagcga
actagaagacactaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (6)   

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