KEGG T06054: 108392109

Manis javanica (Malayan pangolin): 108392109

Entry

108392109         CDS       T06054

Symbol

PAPOLB

Name

(RefSeq) LOW QUALITY PROTEIN: poly(A) polymerase beta

K14376

poly(A) polymerase [EC:2.7.7.19]

Organism

mjv Manis javanica (Malayan pangolin)

Pathway

mjv03015

mRNA surveillance pathway

Brite

KEGG Orthology (KO) [BR:mjv00001]
09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    108392109 (PAPOLB)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mjv03019]
    108392109 (PAPOLB)
Enzymes [BR:mjv01000]
2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     108392109 (PAPOLB)
Messenger RNA biogenesis [BR:mjv03019]
Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     108392109 (PAPOLB)

SSDB

Motif

Pfam:

PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 MTPAP-like_central Nrap_D2

Other DBs

NCBI-GeneID:

108392109

NCBI-ProteinID:

XP_017507618

Position

10:complement(28581967..28586745)

AA seq 634 aa
MMPFPETAPGSQWTPPPPKHHGIPSPIRLAAPKETDCVLTQKLIETLKPFGVFEEEEELQ
RRILILEKLNNLVKEWIQEISESKSLPQAVIENVGGKIFTFGSYRLGVHTKGADIDALCV
APRHVDRSDFFTSFYDKLKLHGEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIP
EDLDLRDDNLLQNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCRNIYSN
ILGFLGGVSWAMLVARICQLYPNAKASTLVHKFFLVFSEWEWPNPVLLKEPEERNLNLPV
WDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTWMVMIEEFKQGLAITHEILLSKAEWS
KLFEAPSFFQKYKHYIVLLASAPTEKQHLEWVGLVESKIRFLVGSLEKNEFITLAHVNPQ
SFPAPIENLDKEEFHTMWVIGLVLQKPEDLDVLSIDLTCDIQSFTDIIYRQAINNKMFEM
DMKIAAMHIRRKELHQLLPNHVLQRKKLHSTDGVTLTALNDSNLDLSVDSEISTSVPSPA
SSMKTGLKTGSSQGRNSPVSAVMTASVTSVQVTEVSLQEASPSESSGGASSESVNQISSQ
PALSPPLKPMVSRVVSSSCLVNHPSRLQGAQQQT

NT seq 1905 nt +upstreamnt +downstreamnt
atgatgccgtttccagagacagcccccggctcacagtggaccccgccgccgcccaagcac
cacggcattccctctcccatccggttagctgcccccaaggagactgactgcgtactcacc
cagaaattaattgaaaccctgaagcccttcggggtttttgaagaggaagaggaactacag
cgcaggattttaattttggaaaaattaaataatctggtaaaagaatggatacaagaaatc
agtgaaagcaagagtcttccacaagctgtaattgaaaacgttggagggaaaatctttaca
tttggttcttacagattaggagtacatacgaaaggtgccgatattgatgcgttgtgcgtt
gcaccaagacatgttgatagaagcgattttttcacctccttctatgataaattgaaactg
catggagaagtaaaagacttgagggctgttgaggaggcatttgtaccagttatcaaactg
tgttttgatggaatagagattgatattttatttgcaagattagcactgcaaactattcca
gaagatttggatttaagagatgacaatctgcttcaaaatttagatattagatgcataaga
agccttaacggttgccgtgtaactgatgaaattttacatctagtaccaaacattgacaac
ttcaggttaaccctgagagccatcaagttgtgggccaaatgccgcaatatctattccaat
atattaggtttccttggaggtgtttcttgggcaatgctagtagcaaggatttgccagctt
tatccaaatgcaaaagcatcaactctagtacataagtttttcttggtattttctgaatgg
gaatggccaaatccagtgctgctgaaagagcctgaagaacggaatcttaacttgcctgtg
tgggacccaagagtaaatcccagtgataggtaccatcttatgcctataattacaccagca
tacccacagcagaactccacatacaatgtatctgtttcaacatggatggtcatgattgag
gagtttaagcaagggcttgctatcacacatgaaattttgctgagtaaggcagagtggtcc
aagctttttgaagctccaagcttctttcagaagtacaagcattatattgtacttctagca
agtgcaccaacagaaaaacaacacctagagtgggtgggcctggtggagtcaaagatccgg
ttcctggttggaagcttggagaagaacgagtttattacattggctcatgtgaaccctcag
tcatttccagcacctatagaaaaccttgacaaggaggaatttcatacgatgtgggtgatt
gggttagtattacaaaagcctgaagacttggacgttcttagtattgatctcacctgtgat
attcagtctttcacagatataatttataggcaagcaataaataataagatgtttgagatg
gatatgaaaattgctgcaatgcatataagaagaaaggaacttcatcaactactacctaat
cacgtgcttcagagaaagaaactgcattcaacagatggtgtcacattgacagctctgaat
gacagcaaccttgacttgtctgtggacagtgaaatcagcacatctgtgccttcacctgct
agctctatgaagaccggcctaaagactggcagttctcagggcagaaacagccctgtctca
gcagtaatgacagcatctgtgaccagcgtacaggttactgaagtttctttgcaagaagcg
agccctagtgaaagctcggggggtgcatcgagtgaaagcgttaatcagatttcctcacaa
ccagccctttctcctccactgaagcccatggtctccagagttgtttcttcatcgtgtctg
gtaaaccatccttcaaggcttcagggagcacagcagcaaacatag

All links

Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (10)   

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