KEGG   Marinobacter sp. LQ44: ASQ50_14755
Entry
ASQ50_14755       CDS       T04470                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
mlq  Marinobacter sp. LQ44
Pathway
mlq03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:mlq00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    ASQ50_14755
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mlq03021]
    ASQ50_14755
   03400 DNA repair and recombination proteins [BR:mlq03400]
    ASQ50_14755
Enzymes [BR:mlq01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     ASQ50_14755
Transcription machinery [BR:mlq03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     ASQ50_14755
DNA repair and recombination proteins [BR:mlq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      ASQ50_14755
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L RNA_pol_A_CTD RNA_pol_L_2 DUF22
Other DBs
NCBI-ProteinID: AMQ89848
UniProt: A0A142FTN9
Position
3209575..3210579
AA seq 334 aa
MQRSVHELLTPRTIDVKESSATRAKVTLEPLERGFGHTLGSALRRILLSSMPGCAVTEAQ
IDGVLHEYSAIEGVQEDVIEILLNLKGVAVKMNGRDDAELTLSKKGPGVVTAGDIKLDHD
VEIANPEHVICHLSENGEVNMRLRVARGRGYEPADQRGLDEDETRAIGRLQLDATFSPVR
RVAYAVESARVEQRTDLDKLVIDLETNGTIDPEEAIRRAATILQQQLAVFVDFDHEKEPE
RVEEEEEIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLDNWPPASLRGDDRVLGG
NT seq 1005 nt   +upstreamnt  +downstreamnt
atgcagcgttcagtacatgagttattgacacctcgtaccattgacgtgaaagaatccagc
gccacgcgcgccaaggttacactggagccgcttgagcgcggtttcggtcacaccctgggt
agcgcactgcgtcgcattctcttgtcttcgatgccgggctgcgccgtgactgaagcacag
atcgacggtgtcctgcacgagtacagcgccattgagggtgtccaggaggacgtcatcgag
attcttctgaatctcaagggcgtcgccgtaaagatgaacggccgtgacgatgctgagctg
acgctcagcaagaagggcccgggtgtagtgactgccggcgatatcaagctggaccacgat
gtggaaatcgctaaccccgagcacgtgatctgtcacctgagcgaaaacggcgaagtcaac
atgcgtttgcgtgttgcccgcggtcgcggctatgagccggctgatcagcgtggtctggac
gaggatgaaactcgtgccatcggacgtttgcagcttgatgctacgttcagcccggttcgc
cgagtggcctatgccgtcgaaagtgcacgggttgagcagcgtacagatctggacaagctt
gttattgatctggagaccaatggcaccatcgatccggaagaagcgattcgccgggcggcc
acgattctccagcagcagctggctgtgtttgtagatttcgatcatgagaaagagccggag
cgtgtagaagaagaggaagaaatcgatccgattctgctgcgcccggttgatgatctggaa
ttgactgtgcgttcagctaactgcttgaaggcagaaaacatttactatatcggcgatctt
atccagcgcaccgaagtggagctgctgaagacgcctaaccttggcaaaaagtcgctgacc
gagatcaaggacgttctggcgtcccgtggtttgtctctgggcatgcgtcttgataactgg
ccgccggcaagccttcgtggtgatgaccgggttctgggcggttga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (8)   

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