KEGG   Melampsora larici-populina: MELLADRAFT_32479
Entry
MELLADRAFT_32479  CDS       T03138                                 
Name
(RefSeq) hypothetical protein
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
mlr  Melampsora larici-populina
Brite
KEGG Orthology (KO) [BR:mlr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mlr03041]
    MELLADRAFT_32479
Spliceosome [BR:mlr03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    MELLADRAFT_32479
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    MELLADRAFT_32479
SSDB
Motif
Pfam: MA3 MIF4G HEAT_5MP1_2
Other DBs
NCBI-GeneID: 18927210
NCBI-ProteinID: XP_007403755
JGI: Mellp1_32479
UniProt: F4R4I7
Position
Unknown
AA seq 678 aa
MRAAFGFLVNFDRSTTKHNTTSLQRPFVLLFIHRSIHHVFTSFSIKSNTFKKKKVFLQSF
PSLYSLKLTINSLFRNSRSISPDHPQSTRTKLSPDPISPPHSPIPIDRINIQIPRIQDDD
PIRRREREDQLRIRLAEQELSSHQKPKPDPKLEMQKAAATRAGGAYIPPAKLRALQAELA
TNDPSSPEYQRMRWDALRKSINGLINKVNVPNIKYIVPELFGENLIRGRGLFVRSIMRAQ
ASSLPFTPVFAALVSIINTKLPTLGELLVTRVVSQFRRAYRRNDKVTCVATTIFIAQLVN
QQVAHHLLAFEMIILLLEKPTDDSVEIAVGFTKEVGAFLSEAEPKANNSVYERFRSILHE
ATISKRVQYMIEVLFQVRKDRFKDNPVLPEGLDLVEEDDIITHPIHLDDDLQVQEGLNVF
KFDPDYLEGEEKYTAIKNEILGVDSDSDSDSNTSAGGSDESSDIDGKVAIHDHTGTNLIN
FRRHVYLTIMSSLDHEEAGHKLLKAGIPEGLELELANMIVECCSQERSYSKFYGLLGERF
CKLNSNWTMTFEECFRNYYDTIHRFETNRLRNIARFFGHLLAQDAIPWSSLEVIKMNEDD
TTSSSRIFVKIMFQELSESLGLPKLANRFKDEEMKVWYNGLFPIDNPKNTRFSINYFTSI
GLGVLTEEMREHLKRAPQ
NT seq 2037 nt   +upstreamnt  +downstreamnt
atgagggcagcttttgggtttctcgtcaactttgatcggtcaacaacaaaacacaacacc
acttcactccaaagaccattcgtcttactattcatccatcgatccatccaccatgtcttc
acctctttctcaatcaaatcaaacactttcaaaaagaaaaaggtattccttcaatccttt
ccatcactttattctttaaaactcaccatcaactctctttttaggaattctagatccatc
agtccagatcatccacagtcaactagaactaaactatcacctgacccgatctcaccaccg
cactctcctattcccatcgatcgtatcaacatccagattcctaggattcaagatgatgat
ccgattcgtagacgtgaacgtgaagatcaacttcgaatcagattagctgaacaagaacta
tcgtctcatcaaaaacctaaacccgatcctaaattagaaatgcaaaaagccgctgctact
agagctggtggtgcttatattcctccggctaagttaagagctcttcaagctgaactggca
actaacgacccttctagtcctgagtatcaacgtatgagatgggatgcattaaggaaatca
atcaacggtctcatcaataaagtcaacgttcccaacatcaaatacattgtacccgagctt
tttggcgagaatttgattcgtggtcgtggcttatttgttcgatcgattatgagagctcaa
gcttcttcgcttccattcacacccgtctttgctgcgctcgtctcgatcatcaataccaag
ttacctactttgggtgaattattagtcacaagggttgtcagtcagtttagaagagcttat
agaagaaacgataaagtcacttgcgtggctactacgatctttattgctcaattagtcaac
caacaagtcgctcatcatctcctagcttttgagatgatcattcttttactcgaaaaaccc
actgatgattcagtcgagattgcggttggtttcaccaaagaagttggcgctttcctttcg
gaggctgaacctaaagccaataatagtgtttatgaacgattccgttcaatcttacatgaa
gctactattagcaaaagggttcaatatatgatcgaagtcttgtttcaagttcgtaaggat
cgattcaaggataatccagtcttacctgaaggattggatctcgttgaagaggatgatatc
attactcatccgattcatcttgatgacgacttacaagttcaagaaggcttgaatgtgttc
aaatttgatcccgattatctggagggtgaagagaaatatacagccatcaagaacgaaatc
ttgggagttgattctgattctgattcagattcaaatacatcagcaggtggtagcgatgaa
agcagtgatatcgatggcaaggttgctatacatgatcacacgggtacaaacttgatcaac
tttcgacgtcatgtttaccttacaatcatgtcctcactcgatcatgaagaagcaggtcac
aaattattaaaagcgggaataccagaaggactcgaattagaattggctaacatgatagta
gagtgttgttcacaagaaagatcatactcgaaattttatggattgctgggagaaaggttt
tgtaaattgaattcgaattggacgatgacatttgaagaatgttttcgaaactattatgat
acgatccatcgatttgaaaccaatcgattacgaaacattgcaagattctttggtcacctt
ttagcacaagatgctataccttggagttcacttgaagtcattaagatgaatgaagatgat
acaactagttcttctagaatctttgtcaagattatgttccaagaattaagtgaaagttta
ggattaccaaaactggcgaatcgattcaaggatgaagaaatgaaagtttggtataatggc
ttatttccgattgataatcccaagaatactagattttcgatcaactactttactagtatt
ggattaggagttttgactgaagaaatgcgtgaacacctcaaacgagctccacagtaa

  All links  
Gene (23)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (29)   

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