KEGG   Moritella marina: FR932_12335
Entry
FR932_12335       CDS       T06214                                 
Name
(GenBank) RecQ family ATP-dependent DNA helicase
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
mmaa  Moritella marina
Pathway
mmaa03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mmaa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    FR932_12335
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mmaa03019]
    FR932_12335
   03400 DNA repair and recombination proteins [BR:mmaa03400]
    FR932_12335
Enzymes [BR:mmaa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     FR932_12335
Messenger RNA biogenesis [BR:mmaa03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     FR932_12335
DNA repair and recombination proteins [BR:mmaa03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      FR932_12335
SSDB
Motif
Pfam: Helicase_C DEAD RecQ_Zn_bind ResIII Thioredoxin_8 SNF2-rel_dom DUF2959 AAA_22
Other DBs
NCBI-ProteinID: QFI38580
UniProt: A0A5J6WNS5
Position
2761650..2763563
AA seq 637 aa
MLHQTLQHYFGYDQFREGQEAVINNIVRGDSSAAIFPTGSGKSLCYQVSALHLPNLTLVI
SPLLALIQDQLLFLKKHNIAAAKIDSSMSVDEVRDTMSKVREGEVKILMISVERLKNERF
RKFIKQVPISLLVVDEAHCISEWGHNFRPDYLKLPQYQKELNIKQALLLTATATPSVIKD
METKFNIAPDNIIKTGFYRANLSLLMHPIAQEKKLHALTRWLGKKSGQASIVYVTLQRTA
EELAAALQEFGIEAVAYHAGMSTDIREEVQQKFMHNGIDCIVATIAFGMGIDKSNIRNVV
HFDLPKSIENYSQEIGRAGRDGNDSQCLVLANLDNQSILENFVYGDTPELNGIEAVLSEI
QSAGTEWEHTLYGLSMSSNLRQAPLKTLLVYLEMQGIIKPLYSYFAEYRFKFLKDPAQIL
NQFTDEKRVFIEEIFNASPAKRTWATVNFERMSEGYQEQRSRVITALEFLHERNSIVLES
KLMTDVYQILNSRFDSQQLATNLHKQFAHKEQSEIKRVHAVGHYIQSTQCLSKGLSTYFG
DDKAPVQCGTCSVCQGRIAQLPQPASMPALSAEQVAELSQAFISACDKRPTPVLTTRFLC
GISTPLFMKMKAKKISNFAALQAYPYQQILTLLTNQQ
NT seq 1914 nt   +upstreamnt  +downstreamnt
atgctgcatcagacgttacaacactactttggttatgatcaattcagagaaggccaagaa
gctgtcattaacaatatcgtcagaggcgattcaagtgcagccatctttccaacgggatca
ggaaagtcgttatgttatcaagtatcggcattacacctgcctaatttgaccttagttatt
tcccccctattagccttgatccaagatcagctattatttttaaaaaagcataatatcgcc
gccgctaaaattgattcgagcatgtctgtcgatgaagtacgcgataccatgtcaaaagta
cgcgaaggcgaagtgaagatcttaatgatttcggtcgaacgtttaaagaacgaacgcttc
cgaaaattcatcaaacaagtaccaatctcgttattagtggtggatgaagcccattgtatt
tcagaatggggacataactttcgtcccgattacctgaaactaccgcaatatcaaaaagaa
ctgaacattaagcaagccttgttattaaccgcaacagcaaccccatcggttatcaaagac
atggaaaccaagtttaatatcgcccctgataatattattaaaaccggtttctatcgcgct
aaccttagcttgttaatgcacccaattgctcaagagaaaaaactccacgcactcacccgc
tggctaggtaagaaatcgggacaagcctctattgtctatgtcactctgcaaagaaccgca
gaagaactggcggcagccttacaagagtttgggattgaagcggtcgcttatcatgccggt
atgtccacagatatacgtgaagaagtacaacaaaaatttatgcacaatggcatagattgc
attgttgccactatcgcttttggcatgggcattgataaaagtaatatccgtaacgtcgtg
cattttgatttaccaaaatccattgaaaactacagccaagaaattggtcgtgccggccgt
gatggcaacgactcacaatgtctggtattagctaatttagacaaccaaagcatcctcgaa
aactttgtttatggtgatactcctgaactaaatgggattgaagcggtactgagcgaaatc
caatctgcgggcactgagtgggaacatactttatacggattatccatgagtagtaacctg
cgccaagcaccgttaaaaactttactggtgtatttagaaatgcagggcattatcaaacct
ctgtattcttattttgcggaatatcgctttaagttcttaaaagatccagcgcaaatactg
aaccaatttaccgatgaaaaacgtgtctttattgaagaaatatttaacgcatcgccagcg
aaacgcacttgggcaacggttaactttgaacgcatgagcgaaggctatcaagaacaacgc
agtcgcgtgatcaccgcgctagagtttttgcatgaacgtaatagcatcgtgctagaaagt
aaattgatgaccgatgtatatcaaatattaaattcgcgttttgatagccagcaattagcc
actaacctgcataagcaatttgcccacaaagaacaaagtgaaattaagcgtgtgcatgca
gttggtcactacattcaaagtacacaatgtttgagtaaaggcttatcaacttactttggt
gatgataaagcaccggtgcaatgtggcacatgctctgtctgtcagggccgtattgcacaa
ctaccacaaccagcaagtatgccagcgttatcagctgaacaagtggcagagctaagccaa
gcgtttatcagtgcttgtgataaacgccctacgcctgtattaaccacacgtttcttatgt
ggcatcagcacacctttattcatgaagatgaaagccaaaaaaatcagtaactttgcagcc
ttgcaagcttacccttatcaacaaatattaacgctactcactaaccagcaataa

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (10)   

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