KEGG   Malurus melanocephalus (red-backed fairy wren): 130577569
Entry
130577569         CDS       T09178                                 
Symbol
APTX
Name
(RefSeq) aprataxin
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
mmea  Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mmea00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    130577569 (APTX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mmea03400]
    130577569 (APTX)
Enzymes [BR:mmea01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     130577569 (APTX)
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     130577569 (APTX)
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     130577569 (APTX)
DNA repair and recombination proteins [BR:mmea03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     130577569 (APTX)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     130577569 (APTX)
SSDB
Motif
Pfam: DcpS_C FHA_2 zf-C2HE HIT FHA DUF7407 FtsK_SpoIIIE_N
Other DBs
NCBI-GeneID: 130577569
NCBI-ProteinID: XP_057229023
Position
Unknown
AA seq 344 aa
MRVCWLVGKEKCTQRVKLPHLEAVVIGRGPETGITDKKCSRQQVQLKADCNKGYVTVKQI
GVNPTSVDLMNIGKDEAVKMKPGQVLHIVNNLYPYTIQFTEESGKTIPKADKMPYEDSCE
NDDIELVPRKTMKLEMMDTEGSSTNPRLGNTSVSAHEETSSKKESLGHWSQGLKSSMQDP
KMQVYKDEKTVVIKDKYPKARYHWLVLPWDPISSLKSVTRDHLELLEHMHAVGQKMIEQC
PAXESLEFRLGYHAIPSMSQLHLHVISQDFDSPALKTKKHWNSFTTDYFLNSQDVIEMVR
SKGKVMVKDHTXELLKLPLKCHCCKQQLSTIPQLKEHLRKHWPK
NT seq 1035 nt   +upstreamnt  +downstreamnt
atgcgcgtgtgctggctcgtgggcaaagagaaatgcactcagcgagtgaaactgccccac
ttggaagccgtggtaattgggcgtggcccagagactgggataacggataagaagtgttca
cggcagcaagttcagttaaaagcagactgtaacaaggggtatgtcacagttaagcagata
ggggtcaacccaactagtgttgatcttatgaatattggcaaggatgaagcagtgaaaatg
aagccaggccaagttctgcatattgtgaataacctttacccctacaccattcaatttact
gaagagtcagggaaaactattccaaaagcagacaagatgccatatgaggactcctgtgag
aatgatgatatagagcttgtgcccagaaaaacaatgaagttggagatgatggatacagaa
ggcagttctacaaatcccaggctaggcaataccagtgtatctgcacatgaagaaacttcg
agcaaaaaggaaagtttaggacactggagtcagggtctaaagagctccatgcaagatcca
aaaatgcaggtttacaaagatgaaaaaactgttgtcatcaaggataagtatcctaaagca
cgttaccactggcttgtcttaccatgggacccaatttcaagcctcaagtcagtcaccagg
gaccaccttgaactcctggaacatatgcatgcagttgggcaaaaaatgattgaacagtgc
cctgccrgagagagcctggagttcagactgggttaccatgctatccccagtatgagtcag
ctacatttgcatgttatcagccaggattttgattctccggccctgaaaaccaaaaaacac
tggaactcttttactacagactacttcttaaactctcaagatgtgatagagatggtaaga
agcaaaggaaaggtgatggtgaaagaccatacckctgaacttctcaaacttcccctcaaa
tgccattgttgtaaacaacagctgtccacaatcccacagttaaaggaacatctcaggaaa
cattggccaaagtga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system