Methylococcus mesophilus: OOT43_04900 Help Entry OOT43_04900       CDS       T09468                                  Symbol recQ Name (GenBank) DNA helicase RecQ   KO K03654   ATP-dependent DNA helicase RecQ [EC:5.6.2.4] Organism mmeo  Methylococcus mesophilus Pathway mmeo03018   RNA degradation Brite KEGG Orthology (KO) [BR:mmeo00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     OOT43_04900 (recQ)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:mmeo03019]     OOT43_04900 (recQ)    03400 DNA repair and recombination proteins [BR:mmeo03400]     OOT43_04900 (recQ) Enzymes [BR:mmeo01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      OOT43_04900 (recQ) Messenger RNA biogenesis [BR:mmeo03019]  Prokaryotic type   Bacterial mRNA degradation factors    RNA degradosome components     Helicases      OOT43_04900 (recQ) DNA repair and recombination proteins [BR:mmeo03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      Supressor       OOT43_04900 (recQ) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RQC DEAD HRDC RecQ_Zn_bind Helicase_C HTH_40 ResIII Motif Other DBs NCBI-ProteinID:  UZR29980 Position complement(1088023..1090182) Genome browser AA seq 719 aa AA seqDB search MPADASSPLKTLQTVFGYERFRGLQAEIIGQLLEGSDALVLMPTGGGKSLCYQIPALLRP GTGVVVSPLIALMEDQVGALLQLGVKAAFLNSSLDFDTQRQVESRFLGGELDLLYVAPER LLTERFLSVLDRVRIALFAIDEAHCVSQWGHDFRADYWQLSLLHQRFPAVPRIALTATAD ERTRGEIIERLGLDEARVFLGGFDRPNIRYAIGQKSNARQQLLEFIRREHEGDAGIVYCL SRKKVEETAAWLCSKGLRALPYHAGLSAETRQHNQRRFLLEEGLIVVATIAFGMGIDKPN VRFVAHLDLPKSLEAYYQETGRAGRDGLPANAWMVYGLQDVITLRSMVESSDADELHKRV ERHKLDAMLGFCELTSCRRQTLLQYFGDTLERPCGNCDNCLNPVQTWDATEAARKALSCV YRSGQRFGAHYVIDLLLGKNSERVRSFGHDRLSTFGIGRELDDKQWLSVFRQLVTQGFLV VDWEAHGALRLSPASRPLLKGEQTLFLRKDEETRKTAASGRDTRRGAIRFSDPQDENLFQ ALRGLRRQLADEQSVPPYVILHDAVLTEMVQRRPETHVQLARIPGIGERKLELYGDEFLE LIREHAGQRGGGDIAEQPTAEESLALFRLGLGVEQIAARRELKPSIIYTHLAQAVARGAL DALEVTGLSADEAARIGSVWRNLPQDRPGAIKPLFEALEGRYDYGVLRCLLVSWGALSN NT seq 2160 nt NT seq  +upstreamnt  +downstreamnt atgcctgccgatgcttccagtcccttgaaaacgctgcagaccgtcttcgggtacgagcgt ttccgcggcctgcaggccgagatcatcgggcagttgctggagggaagcgatgcgctggtg ctgatgcccaccggcggcggcaagtcgctgtgctaccagattccggcgctgctgcggccg ggtactggggtcgtggtctcgcccctgatcgcgctgatggaagaccaggtcggcgccctg ctgcaattgggcgtgaaggccgcgttcctcaattccagcctggatttcgacacccagcgc caggtggagagccgattcctggggggcgagctggacctcctctacgtggcgccggagcgg ctgctgaccgagcgtttcttaagcgtcctcgaccgggttcgcatcgcgctgttcgccatc gacgaggcccattgcgtctcgcaatgggggcacgatttccgcgccgactactggcagttg tcgctgctgcaccagcgcttccctgcggtgccgcgcatcgccctgaccgcgactgccgac gagcggacccgcggggagatcatcgaacggctgggactggacgaggcccgggttttcctc ggcggcttcgaccgccccaacatccgctacgccatcggccagaaatcgaacgcccgccag cagttgctggaattcatccggcgcgagcacgagggcgacgccggcatcgtctactgcctg tcgcgcaagaaggtggaggaaaccgccgcctggctctgcagcaagggcctcagggccttg ccctaccatgccggtttgtccgccgaaacccgccagcacaaccagcgccgcttcctgctc gaggaagggctgatcgtggtggcgaccatcgccttcggcatgggcatcgacaagcccaac gtgcgcttcgtggcgcacctggacctgccgaagagcctggaggcgtattaccaggaaacc ggccgcgcgggccgcgacgggctgcccgccaatgcctggatggtgtacgggctgcaggac gtcatcaccctgcgcagcatggtcgaatcctccgacgccgacgaactgcacaagcgggtg gagcgccacaagctcgacgccatgctgggcttctgcgagctgacctcctgccgccgccag accctgctgcaatatttcggcgacaccctggaacggccctgcggcaactgcgacaactgc ctcaacccggtgcagacatgggatgccaccgaggccgcgcgcaaggccttgtcctgcgtc taccgcagcggccagcgcttcggcgcccattacgtcatcgacctgctgctcggcaagaac agcgaacgcgtccgcagcttcggccacgaccggctcagcaccttcggcatcggtcgcgag ctcgacgacaagcagtggctctcggtgttccggcaactggtgacccagggcttcctcgtg gtcgactgggaggcccacggcgccttgcggctgagccctgccagccgccctctgctcaag ggcgaacagactctgttcctgcgcaaggacgaagaaaccaggaagactgccgcgtccggc cgcgacacgcggcgcggcgcgatccgcttttccgatccccaagacgaaaacctgttccag gctctgcgcggcctgcgtcggcaactggccgacgaacagagcgtcccgccctacgtcatc ctgcacgacgcggtgctgacggaaatggtccagcgccgcccggaaactcacgtccagttg gcacggattcccggcatcggcgagcgcaagctcgagctgtacggcgacgaattcctggaa ctgatccgcgagcatgccggccagcgcggcggcggggacatcgcggagcagcccacggcg gaggaaagcctggcgctgttccggctcggcctgggcgtcgagcagatcgccgcgcggcgt gaactcaagccgtccatcatctatacccatctggcccaggccgtagccaggggcgccttg gatgcgctggaggtgaccgggctgtcggccgatgaggcggcgcggatcggaagcgtgtgg aggaacctgccccaggaccggccgggcgccatcaaacccctgttcgaggcgctggaaggg cgctacgactatggcgtcttgcgttgcctgctggtttcctggggcgcattgtcaaactga

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