KEGG   Myotis myotis (greater mouse-eared bat): 118649037
Entry
118649037         CDS       T07220                                 
Symbol
PRPF19
Name
(RefSeq) pre-mRNA-processing factor 19 isoform X1
  KO
K10599  pre-mRNA-processing factor 19 [EC:2.3.2.27]
Organism
mmyo  Myotis myotis (greater mouse-eared bat)
Pathway
mmyo03040  Spliceosome
mmyo04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:mmyo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    118649037 (PRPF19)
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    118649037 (PRPF19)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mmyo03041]
    118649037 (PRPF19)
   04121 Ubiquitin system [BR:mmyo04121]
    118649037 (PRPF19)
   03400 DNA repair and recombination proteins [BR:mmyo03400]
    118649037 (PRPF19)
Enzymes [BR:mmyo01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     118649037 (PRPF19)
Spliceosome [BR:mmyo03041]
 Complex B
  Other components
   Prp19 complex
    118649037 (PRPF19)
 Complex C
   Prp19-CDC5 complex
    118649037 (PRPF19)
Ubiquitin system [BR:mmyo04121]
 Ubiquitin ligases (E3)
  U-box type E3
   118649037 (PRPF19)
DNA repair and recombination proteins [BR:mmyo03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    118649037 (PRPF19)
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_EML Beta-prop_WDR75_1st ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_TEP1_C NBCH_WD40 Beta-prop_HPS5 Beta-prop_Vps41 WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_DCAF4 U-box PEP5_VPS11_N Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_WDR19_1st PROPPIN Beta-prop_Nup120_160 Beta-prop_SPT8 eIF2A Cytochrom_D1 RMC1_N Beta-prop_WDR35_TULP_N zf-Nse Beta-prop_DCAF12 DUF1830 ATG16 Cep57_MT_bd
Other DBs
NCBI-GeneID: 118649037
NCBI-ProteinID: XP_036151630
Position
Unknown
AA seq 504 aa
MSLICSISNEVPEHPCVSPVSNHIYERRLIEKYIAENGTDPINNQPLSEEQLVDIKVAHP
IRPKPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARL
TKEVTAAREALATLKPQAGLIVPQAVPSSQPSVVGAGEPMELGELVGMTPEIIQKLQDKA
TVLTTERKKRGKTVPEELVKPEELSKYRQVSSHVGLHSASIPGILALDLCPADTNKILTG
GADKNVVVFDKSSEQILATLKGHAKKVTSVVFHPSQELVFSASPDATIRIWSVPSSSCVQ
VVRAHESSVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCALTCAQFHP
DGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWD
LRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYICKQWTEILHFTEHSGLTTG
VAFGQHAKFIASTGMDRSLKFYSL
NT seq 1515 nt   +upstreamnt  +downstreamnt
atgtccttgatctgctccatctccaatgaagtgccagagcacccgtgcgtgtcccccgtc
tccaaccacatctacgagcggcggctcattgagaagtacatcgccgagaacggcaccgac
cccatcaacaaccagcctctgtctgaggagcagctggtggacatcaaagtggctcaccca
atccggcccaagcctccctcagccaccagcatcccagccattctgaaggccctccaggat
gagtgggacgcggtcatgctgcacagcttcactctgcgccagcagctgcagacgacccgc
caggagctgtcccacgcgctgtaccagcacgatgccgcctgccgggtcatcgcccgtctc
accaaggaagtcaccgctgcccgagaagctctggctacgctgaaaccgcaggctggcctc
attgtgccgcaggctgtgccaagctctcagccaagcgttgtgggagccggcgagccgatg
gagctgggcgagctggtgggaatgacgcccgagattatccagaagcttcaagacaaggcc
accgtgctgaccacggagcgtaagaagagaggcaagacggtgcctgaggagctggtgaag
ccggaggagctcagcaagtaccggcaggtgtcttcccacgtgggcctgcacagcgccagc
atccccgggatcctcgccctggacctctgccctgccgacaccaacaagatcctcactggc
ggggcggacaagaacgtcgtcgtcttcgacaagagctccgagcaaatcctggccaccctc
aagggccacgccaagaaggtcaccagcgtggtgttccacccctcccaggagctggtgttc
tctgcttccccggacgccaccatcaggatttggtcggtcccgagctcctcctgtgtgcag
gtggtgcgggcccacgagagctctgtgacgggcctcagcctccacgccactggcgactat
ctcctgagctcctccgatgaccagtactgggccttctcggacatccagacggggcgcgtg
ctcaccaaggtgacggatgagacctctggctgcgctctcacctgtgcgcagttccacccc
gatggactcatctttgggacaggaaccatggactctcagatcaagatctgggacctgaag
gagcgcaccaacgtggccaacttccccggccactcgggccccatcaccagcatcgccttc
tccgagaacggctactacctggccacggcggccgacgactcctccgtcaagctctgggac
ctgcgtaagctgaagaacttcaagacgctgcagctggataacaactttgaggtgaagtcc
ctgatctttgaccagagcgggacctacctggccctggggggcaccgacgtccagatctac
atctgcaagcagtggacggagattctccacttcacagagcacagcggtctgaccacaggg
gtggctttcgggcagcacgccaagttcatcgcgtccacgggcatggacaggagcctcaag
ttctacagcctgtag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (43)   
   Pfam (43)   
All databases (51)   

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