KEGG   Mus pahari (shrew mouse): 110323997
Entry
110323997         CDS       T05929                                 
Symbol
Papola
Name
(RefSeq) poly(A) polymerase alpha isoform X1
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
mpah  Mus pahari (shrew mouse)
Pathway
mpah03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    110323997 (Papola)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mpah03019]
    110323997 (Papola)
Enzymes [BR:mpah01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     110323997 (Papola)
Messenger RNA biogenesis [BR:mpah03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     110323997 (Papola)
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 MTPAP-like_central RMD6 Polbeta
Other DBs
NCBI-GeneID: 110323997
NCBI-ProteinID: XP_021057044
Ensembl: MGP_PahariEiJ_G0029850
Position
7:99818388..99872563
AA seq 739 aa
MPFPVTTQGSQQTQPPQRHYGITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQR
RILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVA
PRHVDRSDFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPE
DLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNI
LGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVW
DPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSK
LFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQS
FPAPKESPDREEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFELD
MKIAAMHVKRKQLHQLLPSHVLQKRKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTS
AMKTSPLNSSGSSQGRNSPAPAVTAASVTSIQASEVSVPQANSSESPGGPSSESIPQTAT
QPAISPPPKPTVSRVVSSTRLVNPSPRPSGNTATKVPNPIVGVKRTSSPNKEESPKKTKT
EEDETSEDANCLALSGHDKTETKEQVDLETSAVQSETVPASASLLASQKTSSTDLSDIPA
LPANPIPVIKNSIKLRLNR
NT seq 2220 nt   +upstreamnt  +downstreamnt
atgccgtttccagttacaacgcagggatcacaacaaacgcagccaccacagaggcactat
ggcattacctctcctatcagcttagcagcccccaaggagactgactgcctactcacacag
aagctcatcgagacgctgaagccctttggggttttcgaagaggaagaggaactgcagcgc
aggattttaattttgggaaaattaaataacctggtgaaagaatggattcgagaaatcagt
gaaagcaagaatctcccacaatctgtaattgaaaatgtcggagggaaaatttttacattt
ggatcttacagactaggagtccacacgaaaggtgctgatattgatgcgttgtgtgttgca
ccaagacatgttgatcgaagtgactttttcacctcattctatgataaattgaaattacaa
gaagaagtgaaagatttaagagctgttgaagaggcatttgtaccagttatcaaactctgt
tttgatgggatagagattgatattttgtttgcaagattagcactgcagactattccagaa
gatttggacctacgagatgacagtctgcttaaaaacctagatataagatgtataagaagc
cttaatggttgcagggtaaccgatgagattttacatctagtaccaaacattgacaacttc
aggttaactctgagagccatcaaactgtgggccaaacggcacaacatctattccaatata
ttaggtttcctcggtggtgtttcctgggctatgctagtagcaagaacttgccagctttat
ccaaatgcaatagcatcaactcttgtacataaatttttcttggtattttctaaatgggaa
tggccaaatccagtgctattgaaacagcctgaagaatgcaatcttaatttgcctgtgtgg
gacccaagggtaaaccccagtgataggtaccatcttatgcctataattacaccagcatac
ccacagcagaactccacgtacaatgtgtccgtttcaacacggatggtcatggttgaggag
tttaaacaaggtcttgctatcacagatgaaattttgctgagtaaggcagagtggtccaaa
ctttttgaagctccaaacttctttcagaagtacaagcattatattgtacttctagcaagt
gcgcccacggaaaagcagcgtctggaatgggtgggcttggtggaatcaaaaatccgtatc
ctggttggaagcttggagaagaatgagtttattacactggctcatgtgaatccccagtca
tttccagcccccaaagaaagtcctgacagggaagaatttcgcacaatgtgggtgattggg
ttagtgtttaaaaaaactgaaaactctgaaaacctcagtgtggacctcacctatgatatc
cagtctttcacagacacagtttataggcaagcaataaacagcaaaatgtttgagttggat
atgaagattgcagcaatgcatgtgaagagaaagcaactccatcagctgctgcctagtcac
gtgcttcagaagaggaagaagcattcaacagaaggagtcaagttaacagctctgaatgac
agcagccttgacttgtctatggacagtgataacagcatgtctgtgccttcacccactagt
gctatgaagaccagtccattgaacagttctggcagctctcagggcagaaacagtcctgct
ccagctgtgaccgcagcatctgtgaccagcatccaggcttcggaggtttctgtaccgcaa
gcaaattccagtgaaagcccagggggtccatcgagtgaaagcattcctcaaactgccaca
cagccagccatttctccaccaccaaagcctacagtctccagagttgtctcctcaacacga
ctggtaaacccatcgcctagaccttcaggaaacacagcaacgaaagtccctaatcctata
gtaggagtcaagagaacgtcctcacccaataaagaagaaagtcctaagaaaaccaaaaca
gaagaggatgaaacaagtgaagatgctaactgtcttgctttgagtggacatgataaaaca
gagacaaaggaacaagttgatctggagacaagtgctgttcaatcagaaactgttccggca
tcggcttctctgttggcctctcagaaaacatccagtacggacctttctgacatccccgcc
ctccctgcaaaccccatccctgtcatcaagaactcaataaagctgaggctgaatcggtaa

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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