KEGG   Manduca sexta (tobacco hornworm): 115447163
Entry
115447163         CDS       T07401                                 
Name
(RefSeq) probable tyrosyl-DNA phosphodiesterase
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
msex  Manduca sexta (tobacco hornworm)
Pathway
msex03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:msex00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    115447163
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:msex03400]
    115447163
DNA repair and recombination proteins [BR:msex03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     115447163
SSDB
Motif
Pfam: Tyr-DNA_phospho zf-CCHH DUF2126
Other DBs
NCBI-GeneID: 115447163
NCBI-ProteinID: XP_030029995
Position
26:complement(1177732..1188812)
AA seq 616 aa
MDSNKRKQMADDKVAKRVKKACDYGENCYRRNPAHFREFSHPHLETILDAHNGSGPYPIP
DKYSLQRHMITEQLDVIVEKKLYQPADSAQNEAESSSTQSNVKQETKPTSTQDTSTVTKI
LTVPKVKDKKDEKDTGKGSREKSKSPIRTDVKTDKKKDSDYRPIVPPTRRVESYLNVVRP
KGQMAAKHAASAPYHIFYTTITAAKETHSQPYSITFQEILDHSLGELKCSLQINFMVEIG
WLLAQYYFAGYSEKKLTILYGEDCSDLKNISKKKPQVDAHLVTMATPFGKHHTKMMLLCY
EDGSLRVVISTANLYIDDWENRTQGLWFSPRCPELPAEAMPCDGESPTFFKRSLLRYLNH
YHMPQLAHYVERVKRCDFSHINVFLVASAPGSHFDMDWALTRVGSLLRQHCCVPPAEQRH
WTLLAQASSLGSYGKEPKLWLTGDFLHYFTKIRNQSQMLSSPPDLKLVYPSLENVKQSHD
GLLGGGCLPYAAEAHAKQPWLNNYLYQWRATSTHRDRAMPHIKSYTRVSRDHKRAAYFLL
TSANVSKAAWGSINKGNAALRVMSYEAGVLLLPRFVINEDFFPLDEGRGNGLVIPYDIPP
QKYTSDMSPWVSDYLM
NT seq 1851 nt   +upstreamnt  +downstreamnt
atggattctaacaaacgcaagcaaatggcagatgataaagttgcgaaaagagtgaagaaa
gcttgtgattacggcgagaactgttacaggaggaatccggcacacttcagggaatttagc
catccgcatttagaaactatcctcgacgcacacaatggcagcggtccatatcccatccca
gacaagtacagccttcagaggcacatgattacggaacaactagatgttattgtagagaag
aagttgtatcaacctgcagatagtgcacaaaatgaagctgagagcagttcaacacaatca
aatgtaaagcaagaaacaaaaccaaccagtactcaagacacaagtactgtaacaaaaatt
ttaaccgtgccaaaagtaaaagacaagaaagatgaaaaagatacaggaaaaggaagcaga
gagaagagtaaatcaccaatcagaacagatgttaaaacagacaaaaagaaagattcagac
taccgtcccatagtcccgcccacgcgtcgagtcgagagctacctcaacgtggtgcggccg
aagggtcagatggccgccaaacacgccgccagcgcgccctaccacatattctacaccacc
atcacagctgccaaggagacgcactcgcagccatactccatcacattccaagaaatatta
gaccacagcttgggcgagttgaaatgctccttacaaataaacttcatggtggagattggt
tggctgctcgctcagtattacttcgcggggtacagtgaaaagaagttgacaatactgtac
ggggaggactgttcggacctaaagaatatatctaagaagaagccgcaggtggacgcgcat
ctggttaccatggcaacgccgttcgggaagcatcacacaaaaatgatgttgctctgctac
gaggacggttcgctccgagtcgtgatctcgacggccaacctgtacatcgacgactgggag
aacaggacccaggggctctggttcagcccgcgctgcccggagctgcccgcggaggcgatg
ccgtgcgacggcgagtccccgaccttcttcaagaggtccctgctgcggtacctcaaccac
taccacatgccgcagctcgcccactacgtggagagggtcaagagatgcgacttcagccat
atcaacgtgttcctagtagcgtcggccccaggctcccacttcgacatggactgggcgctg
acccgagtggggtcgctgctgcgccaacactgctgtgtaccccccgcggagcagcgacac
tggacactcctcgcgcaggccagcagcctcggcagctacgggaaggagcccaagttgtgg
ctgacgggcgacttcctgcactacttcacgaagataaggaatcagtcgcagatgctgtcc
tcgccgcctgacctcaaactagtgtatccttcgttagagaacgtgaagcagtctcacgac
gggttgctgggcggcggctgcctcccctacgccgcggaggcgcacgccaaacaaccctgg
ctcaacaactacctctatcaatggcgagcaacgtccacacatcgtgaccgcgcgatgcct
cacataaagtcgtacacgcgcgtctccagagaccacaagagggctgcgtacttcctcctg
acctccgccaacgtcagcaaagcggcctggggctccatcaacaagggcaacgcagcgctc
agggtcatgagctacgaggctggtgtgctgctgctgccgcggttcgttataaacgaagac
ttcttccccctggacgaagggagggggaacggcctggtgatcccttacgatatcccacca
cagaagtacacgagcgacatgtccccgtgggtgtcggattatttaatgtag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (7)   

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