KEGG   Manduca sexta (tobacco hornworm): 115449588
Entry
115449588         CDS       T07401                                 
Name
(RefSeq) DNA repair protein XRCC1
  KO
K10803  DNA-repair protein XRCC1
Organism
msex  Manduca sexta (tobacco hornworm)
Pathway
msex03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:msex00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    115449588
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:msex03400]
    115449588
DNA repair and recombination proteins [BR:msex03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     115449588
SSDB
Motif
Pfam: XRCC1_N BRCT PTCB-BRCT BRCT_2 LIG3_BRCT
Other DBs
NCBI-GeneID: 115449588
NCBI-ProteinID: XP_037293331
Position
11:complement(1675140..1687969)
AA seq 683 aa
MPRVKIDYVVSFSSEDPENPASNLLAREVSKKKWLCKTGESSASVVLQLAKAVKISAVHI
GAYNAATVEVLVGRSEKPDEPFQVLLPSSVFVSAGEARRGAAERGAAERVRSFGAAQLAA
HAAQRWDRLRLVCTQPYNKHCQYGISFIHLDEPEDSNDVVSSVTSAVPPRLFVVDSTPGS
SDEEEFRPGELFAKHVQHASTKHTNTETQIRQASSQALKHLSDSASRLTKTPISKQAASP
PAPAHAHRDRLLHTHKQRKDERNKLNLDPTKQMADKNKDKTETSTKAKDGNKRDENGRSS
SDEPPKDSTALHKRRDSNSRDTARDTDSAHNSTNKRDSVGHKRDNAAVRGGTDTHSHPRS
RHDKRDDTRGKRPRETKDRAPTDDDERVGPRCAQPLRGVVFALSGYENPERGALRDTAVR
LGARYERHWTPRCTHLVCAFPNTPKLKQLRAEAGGAAPAVRGAWLRQCAARARRLPWRWF
ATEPQHRRAPPDLSALSTLSGDSDLSSECDTDDEIQDVLQNQKKQRRHSPEQTLPDTAAT
DNGRADDDDTDADAVLNDSDVMFVKDERYRGQVTVEDSDSEETVCDEEPKSKKEEIDENK
SLPNFFDGYTFAIDARESRGDDADLVRRYVRAYGGVVVDGEADYVVCVSGRTEMGSVGRL
GGRVVSPSWVWACHRCRSLLPPN
NT seq 2052 nt   +upstreamnt  +downstreamnt
atgccccgtgtgaaaatagactatgtcgtcagtttcagcagcgaggatcctgagaaccct
gccagcaacctgttggctcgggaggtgagcaagaagaagtggttgtgtaagacgggcgag
tcctctgcctctgtggtgctgcagctcgctaaagctgtcaaaatttcagcagtccacatt
ggagcatacaatgcagcaactgttgaagtgctagtaggacgctcagagaaaccagatgaa
ccattccaggtgctgttgccgagcagcgtgttcgtgagcgcgggcgaggcgcggcgcggc
gcggcggagcgtggcgcggcggagcgcgtgcgctcgttcggcgccgcgcagctcgccgcg
cacgccgcgcagcgctgggaccgcctgcgcctcgtctgcacacagccatataacaaacac
tgccagtatggcatatctttcatccatttggacgagcctgaagactctaacgacgtggtt
tcgagtgtgacatcagcagtgcctccgcgcctctttgtcgtggactccacaccgggttcc
tcggacgaggaggagttccgacccggggaactgttcgccaaacatgtgcagcacgccagc
accaaacataccaacacagaaactcaaataagacaagcgtcgtcgcaagcgttgaagcac
ttgtcagacagcgcgtcgcgcctcaccaagacgccgatctcgaagcaggcggcgagcccg
cccgcgcccgcgcacgcgcaccgcgaccgcctgctgcacacacacaagcaacgcaaggac
gaacgaaacaaactaaatctagaccccactaaacaaatggccgataagaacaaagacaag
acagaaacgagtacgaaagcgaaggacggcaataaacgggacgagaacggtcgaagctcg
agcgacgagccgccgaaggacagcaccgcccttcacaaacggagagatagcaacagccgc
gacaccgcgcgtgacactgacagcgcacacaactcgaccaacaagcgggacagtgtcggt
cacaaacgcgacaacgccgctgtcagaggcggcaccgacacgcactcgcaccctcgctcg
aggcatgacaagcgtgacgacactcgcgggaaaagaccacgagaaactaaagaccgcgcg
ccaacagatgatgacgagcgcgtgggtccgcgctgcgcccagcccctgcgcggcgtggtg
ttcgcgctgagcgggtacgagaaccccgagcgcggcgcgctgcgcgacacggccgtgcgc
ctcggcgcacgctacgagcgccactggacgccgcgctgcacgcacctcgtatgcgcgttc
ccgaacacgccgaagctgaagcagttgcgcgcggaggcgggcggcgcggcgccggcggtg
cgcggcgcgtggctgcggcagtgcgcggcgcgcgcgcggcggctgccgtggcgctggttc
gccaccgagccgcagcaccgccgcgcgccgcccgacctctccgcgctctccaccctctcc
ggcgactccgacctctccagcgaatgtgatacggatgacgagatccaagacgtactccaa
aatcaaaagaaacagcggcgccactcgcctgagcagactctacctgataccgccgccacc
gacaacggccgcgccgatgatgacgacaccgacgcggacgcagttctgaacgactctgac
gtcatgttcgtgaaggacgaacgttaccgcggacaagtgactgttgaggactcggacagt
gaagaaaccgtctgtgacgaggaaccaaaatctaagaaagaagagatagatgaaaacaaa
tccttgccgaacttcttcgacggatacacattcgcgatcgacgcccgcgagtcccgcggc
gacgacgccgacctcgtgcgcagatacgtgcgcgcctacgggggagtcgtcgtggacgga
gaggcggactacgtggtgtgtgtgtcggggcggacggagatgggtagtgtgggtcgtttg
ggcgggcgtgtagtgtcgccgtcctgggtgtgggcctgccaccgatgccgctcgctgctg
ccgcccaactga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (9)   

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